Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02375 ATGGATTCAGCGACAACAGCTCCTCCCCCATCGCAGGAGCTGGACCTGGACAACCTCAAAGCCCTCAAAGTCCTAGGAAAAGGTGCCATGGGGACTGTCTTCCTCGTCCACGACACAACCACCAAGTCCCACTTCGCGTTGAAAGTGGTGGACAAAACGTGCCTCCACGCGAAGCTCGACGCGGAACGCCGAGCGCGTTGGGAAATCCAAGTCCTCTCAACCCTCTCGCACCCCTTCCTCCCTTCTCTCATGGGAACATTCGAGTCCCCACAGTTATTAGCGTGGGCCCTACCCTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCTACCGCCAAACCGACCGCACCTTCTCCCCCGCCGTCATCCGCTTCTACGTAGCGGAAATCATCTGCGCGCTCGACCACCTCCATTCCATGGGCATCGCATACCGCGACCTTAAACCCGAAAATGTCCTCGTCCAAAACACCGGCCACGTCACCCTCACCGATTTCGACCTCTCCCGCAAACTCACCCTCAAACCTAAACCCCTCCTTCCTTTGATCCCCGACCCCAATCTCAAACTCCCAGAACCCCGCCGCAAACACCGCCGCAACTTCTCCCGCTGGATCCCTCATCTTCCCCTCGAAGGGACTCGTAGGCACGCCAACTTCAACGCCCTCAAGAAGACCAAGTCCGCGCGAGTCAGCCCGGTGAGTCGACGAAAACTGAGTTTCTCCAACGGCGAACGCTCCAACTCGTTCGTCGGCACCGAGGAATACGTCTCGCCGGAGGTCGTCCGAGGCGACGGTCACGAGTTCGCGGTCGATTGGTGGGCCCTCGGAATCCTCATCTACGAAATGCTCTACGGTACCACGCCGTTCAAAGGCAAGAATCGCAAGGAAACGTTCCGCAACGTCCTCGTGAAGTCGCCGGAGTTCGTCGGGAAGAGAACCGCGCTGACGGACCTTATCGAGAAGCTACTGAAGAAGGATCCGACGAGGCGGTTGGGCTACACGCGCGGCGCTGATGAAATCAAGGAGCATGAATTCTTCCGAGGGGTGCAGTGGGAGCTTTTGACGGAGGTGGTGCGGCCGCCGTTCATTCCGTCTCGAGACGACGGCACCGCCGAGTCGTTAGAGATGATTTCGGCCGGGAATCGTGGCTTGAATATTAGGGATTACTTTCAGAGTCGAAGATCGTTGCCGGCTTCGCCGTCGCCGTCGCCATCGCCGTCGTGTAGGTTTAAGAAGAATGTTTCTTTAACGGAATTCTAA 1254 0.5813 MDSATTAPPPSQELDLDNLKALKVLGKGAMGTVFLVHDTTTKSHFALKVVDKTCLHAKLDAERRARWEIQVLSTLSHPFLPSLMGTFESPQLLAWALPYCPGGDLNVLRYRQTDRTFSPAVIRFYVAEIICALDHLHSMGIAYRDLKPENVLVQNTGHVTLTDFDLSRKLTLKPKPLLPLIPDPNLKLPEPRRKHRRNFSRWIPHLPLEGTRRHANFNALKKTKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGTTPFKGKNRKETFRNVLVKSPEFVGKRTALTDLIEKLLKKDPTRRLGYTRGADEIKEHEFFRGVQWELLTEVVRPPFIPSRDDGTAESLEMISAGNRGLNIRDYFQSRRSLPASPSPSPSPSCRFKKNVSLTEF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02375 417 SMART serkin_6 19 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02375 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Spst2g02375 417 Gene3D Transferase(Phosphotransferase) domain 1 241 363 - -
Spst2g02375 417 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Spst2g02375 417 Pfam Protein kinase domain 21 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02375 417 Pfam Protein kinase domain 239 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02375 417 Gene3D Transferase(Phosphotransferase) domain 1 104 171 - -
Spst2g02375 417 FunFam Serine/threonine-protein kinase UCNL 19 103 - -
Spst2g02375 417 FunFam Serine/threonine-protein kinase OXI1 242 363 - -
Spst2g02375 417 FunFam Serine/threonine-protein kinase OXI1 104 172 - -
Spst2g02375 417 PANTHER FLIPPASE KINASE 1-RELATED 12 364 - -
Spst2g02375 417 ProSiteProfiles Protein kinase domain profile. 19 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02375 417 Gene3D Phosphorylase Kinase; domain 1 19 103 - -
Spst2g02375 417 SUPERFAMILY Protein kinase-like (PK-like) 16 402 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02375 Spst-Chr2 23353045 23354298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02375 14 417 AGC Kinase Gene Family AT3G20830 60.432 2.44e-165 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst2g02375 Pkinase 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02375 - - gmx:100785281 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00372 5 3076552 3077676 Spst2g02375 2 23353045 23354298 PCT