Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02373 ATGGAGATCTATGTTATCACGAGCTACAAGATAAGAGCATGGAGGTTAGGTCCATCCAATCTAAGGATTAAGGAAGGGATATTGATATGGTGGGAAGACTTGATACTACGAGTACTACGGCAACTATTATGGTGTACCATTTTTTCTAACACCTGCACGCCCACCACTGCCACGTCCGCCTCTGCCACTACAGGTGTTGTTGCATTTGTCTTGGTTGGTTTTCATGCCACGATTAGTATTATGATGACTCTGGGAATTAATTGGAGCTTTCATCCACGGTTAAGAATGCGGAGGAACCCGATTCACGAGTTCGACCTCCGTGAGAGGGATGATGTGTTCAAGATTTATTTCCGATGCGATTCTGAGCTTGTTAGATCCACGACAAAGTTTCGTTTCCCAGATTCTTTTGTAAAAAATTCTTCCTCTGGCCAACAGGAATTTGAGATTAGTTTGGTGGTGGAAATTGTTGGTTGTAATTTGCTGATATGGACGGTGAATAGAGACGTAGGGGGAAAGTTGGAAAAGATGGACCATGACAAGACTGGGTGCCAAGCTCCTCCTGAAGGTCCTGTATTGTGCATCAACAACTGTGGGTTTTTTGGAAGTGCAGCTACTATGAACATGTGTTCTAAATGCCACAAAGACATGTTGCTGAAACAGGAGCAGGCCAAGCTTGCAGCGTCGTCCATTGGGAATATTATGAATGGCTCATCTAGCAGCACTGAAAATGAACCTGTTGTCGCTGCTGCTAATGTTGATATCCCAGTTATTTCAGTAGAGCCTAAAACTGTCTCTGTGCAACCTTTATTTGGTTCAGTTTCAGAGGGGAGTGGGGAGGCAAAGCCGAAGGATGGTCCAAAACGTTGCAGCAGCTGCAATAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGCAACCTTTTTTGTGCTGTACATCGCTACTCAGACAAGCATAATTGCCCGTTTGATTACCGCACTGCTGCTCGGGATGCCATAGCTAAAGCAAACCCCGTCGTCAAGGCTGAGAAGCTTGATAAGATCTAA 1047 0.4489 MEIYVITSYKIRAWRLGPSNLRIKEGILIWWEDLILRVLRQLLWCTIFSNTCTPTTATSASATTGVVAFVLVGFHATISIMMTLGINWSFHPRLRMRRNPIHEFDLRERDDVFKIYFRCDSELVRSTTKFRFPDSFVKNSSSGQQEFEISLVVEIVGCNLLIWTVNRDVGGKLEKMDHDKTGCQAPPEGPVLCINNCGFFGSAATMNMCSKCHKDMLLKQEQAKLAASSIGNIMNGSSSSTENEPVVAAANVDIPVISVEPKTVSVQPLFGSVSEGSGEAKPKDGPKRCSSCNKRVGLTGFNCRCGNLFCAVHRYSDKHNCPFDYRTAARDAIAKANPVVKAEKLDKI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02373 348 Gene3D - 176 244 - -
Spst2g02373 348 SMART AN1_Zf_4 289 326 IPR000058 GO:0008270
Spst2g02373 348 Pfam A20-like zinc finger 192 214 IPR002653 GO:0003677|GO:0008270
Spst2g02373 348 ProSiteProfiles Zinc finger A20-type profile. 187 221 IPR002653 GO:0003677|GO:0008270
Spst2g02373 348 FunFam Zinc finger AN1-type containing 6 264 344 - -
Spst2g02373 348 Pfam AN1-like Zinc finger 289 325 IPR000058 GO:0008270
Spst2g02373 348 SUPERFAMILY AN1-like Zinc finger 277 343 IPR035896 -
Spst2g02373 348 Gene3D - 272 344 IPR035896 -
Spst2g02373 348 SMART A20_3 190 214 IPR002653 GO:0003677|GO:0008270
Spst2g02373 348 PANTHER AN1-TYPE ZINC FINGER PROTEIN 188 348 - -
Spst2g02373 348 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 192 228 - -
Spst2g02373 348 ProSiteProfiles Zinc finger AN1-type profile. 283 329 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02373 Spst-Chr2 23287463 23296973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02373 183 348 C2H2 Transcription Factor Family AT3G52800 42.690 1.09e-35 126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02373 2 23287463 23296973 Spst2g02373 2 23287463 23296973 ECH