Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02367 ATGACCAATTCCTACAGATCCAATGACCTTAACTTTTGGTTGGACCTCAATTCACCATGTCTTCTCTCTTCTCCTTCTTCATCTACTCCTCCCATCAATCCACCATTCTATTTTCCTTCCAATTATCATTCCTACACAAGTGCCATATCTTCCACTCAGTTCCAAGCCTCTCCTTCTCAAACAAAAGCCCTCCACTTCCTTCATCTAAGACATGCAGTAGAAGAAGAAGGACAAGAAGAAGAAGAAGAAGAAGAAGATCTTGAATCTTCATTCAGTGCCATGGAAGTGGACAAGAAAAAGAAAGAGCTAAGTGCATCATCATCATCCAGGTGCTTGGATGAAGAGGATGCTGTGACTGTGGCTTTACACTTAGGGCTTTCAAGCACTAGTGCATCTGCTGATTTAGCCTCAAGCCTATACTCAGCAGAGGTTTCTGACAAAGAAGAAAAAACCATTGATGCTTCGGGGCTTCTGTCAAATAGAATTAACCGAGGACAATATTGGATCCCTACTTCTGCTCAGATTCTGATTGGCCCAACACAGTTCGCATGCCCTCTTTGTTTCAAGACGTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATACAGAAAGGGACCAGAGTCTCTAAGGGGAACACAGCCAACAGCTATGCTAAGACTCCCTTGCTATTGCTGTGCTCCCGGATGCAAGAACAACATCGACCATCCGAGAGCAAAACCACTCAAAGACTTCAGAACCCTCCAAACACATTACAAGAGAAAGCATGGGACAAAGCCTTTCGTGTGCAGAAAATGTTGCAAAACATTTGCTGTGAGGGGTGATTGGAGAACTCATGAGAAGAACTGTGGAAAACGCTGGTATTGTTCTTGTGGGTCTGATTTTAAGCACAAAAGATCTCTTAAAGATCATATCAAGGCATTTGGATATGGACACACGGCTTATAAAAATGACTGCATGAACCTTGATCAGGACGATGATCAACCAGGCTCTGAGTTTGAACAAGAAAATTAA 1029 0.4295 MTNSYRSNDLNFWLDLNSPCLLSSPSSSTPPINPPFYFPSNYHSYTSAISSTQFQASPSQTKALHFLHLRHAVEEEGQEEEEEEEDLESSFSAMEVDKKKKELSASSSSRCLDEEDAVTVALHLGLSSTSASADLASSLYSAEVSDKEEKTIDASGLLSNRINRGQYWIPTSAQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGTKPFVCRKCCKTFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGYGHTAYKNDCMNLDQDDDQPGSEFEQEN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02367 342 PANTHER ZINC FINGER PROTEIN WIP2 48 340 IPR043584 GO:0003700|GO:0010468
Spst2g02367 342 Coils Coil 70 90 - -
Spst2g02367 342 Gene3D Classic Zinc Finger 244 324 - -
Spst2g02367 342 ProSitePatterns Zinc finger C2H2 type domain signature. 184 204 IPR013087 -
Spst2g02367 342 FunFam Zinc finger protein WIP2 235 317 - -
Spst2g02367 342 SUPERFAMILY beta-beta-alpha zinc fingers 248 286 IPR036236 -
Spst2g02367 342 ProSiteProfiles Zinc finger C2H2 type domain profile. 182 209 IPR013087 -
Spst2g02367 342 MobiDBLite consensus disorder prediction 74 94 - -
Spst2g02367 342 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02367 Spst-Chr2 23226483 23228649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02367 118 340 C2H2 Transcription Factor Family AT3G57670 66.142 3.47e-118 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g02367 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02367 - - gmx:100802239 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00375 5 3093729 3095718 Spst2g02367 2 23226483 23228649 PCT