Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g02366 | ATGCAGGAGAGTTCGTATCCTTCAAGTTCAAGCTTTTATAAGTTTGGATTATCTGAACCTGAGAATTCATCGTACTATCGTTACGGCCATGGTTATGAGATAAGTCATCACGAACCACTGGTGGATGAGTATAGGAGACCTTCAGAGAACTCATTGACACTCAATGAACAGCCAGCAGCAGTAAGCACAGAATGGGTTGAAAGTGGAAACACTGATGCACGGGACAATTCTATCGAATGTCCTCGAAGACATCATAGTAATTCAAGTGATTATCAGGTCATTTGGCAAGATAATATTGATCCCGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAAGCTGTTGGAACCCAAAGCCGCGGTCTCACCCAAGAACAGATCTCCTCACTCCCAGTGTCGAAGTACAAATGTGGTTTCTTCTTGAGGAAGAAGTCACGAGATGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGCGTATCACCTTGCCATGTAAACATCTTTATCATGCTAGTTGTGGGAACAGGTGGCTTAGCATCAATAAGGCTTGCCCTATATGTTACACAGAAGTGTTTGCCGACAAGTCAAAACACAAATAA | 612 | 0.4248 | MQESSYPSSSSFYKFGLSEPENSSYYRYGHGYEISHHEPLVDEYRRPSENSLTLNEQPAAVSTEWVESGNTDARDNSIECPRRHHSNSSDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISSLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHLYHASCGNRWLSINKACPICYTEVFADKSKHK | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g02366 | 203 | SMART | ring_2 | 151 | 191 | IPR001841 | - | |
Spst2g02366 | 203 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 112 | 197 | IPR013083 | - | |
Spst2g02366 | 203 | Pfam | Ring finger domain | 150 | 191 | IPR001841 | - | |
Spst2g02366 | 203 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 2 | 197 | IPR033276 | GO:0004842|GO:0016567|GO:0046621 | |
Spst2g02366 | 203 | ProSiteProfiles | Zinc finger RING-type profile. | 151 | 191 | IPR001841 | - | |
Spst2g02366 | 203 | FunFam | E3 ubiquitin ligase BIG BROTHER | 113 | 196 | - | - | |
Spst2g02366 | 203 | SUPERFAMILY | RING/U-box | 150 | 198 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g02366 | Spst-Chr2 | 23213230 | 23215950 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g02366 | 9 | 202 | C3H Transcription Factor Family | AT3G63530 | 45.918 | 6.92e-56 | 176 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g02366 | K19045 | - | gmx:100793907 | 406.371 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst5g00380 | 5 | 3120192 | 3124434 | Spst2g02366 | 2 | 23213230 | 23215950 | PCT |