Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02360 ATGGAGATCATGTCAACCTTGAAGAGAGACCTGAATGACATGAGGGAGTATTATGAGAGTGGAATGACTAAGCAAGCGTCTTGGAGAGAATCTCAGCTCAAAGGGTTGCGTTGCTTCCTCATGGAAAAACAGGACCTTATCATGGAGACCCTCATGCAAGATTTAGGGAAACATCAACTTGAAGCTTTTAGAGACGAGATAGGGACGTTGATCAAGACCTTAAATCTGGCACTGAAGTCTTTGAAAGGTTGGATGTCGGGAAAAAAGGCTGAATTGCCACAAATAGCATTGCTCACCAGTGCAGAAATTGTTCCTGAACCACTTGGTCTGGTCCTCATTATTTCATCTTGGAATTTCCCATTTGGACTATCCTTGGAGCCATTGATAGGAGCAGTAGCTGCGGGAAACACAGCAATCTTAAAGCCTTCCGAGTTGTCTCCAGCTTGTTCTTCTCTACTTGCTTCTAGTCTCACCACTTATTTGGACAACAAAGCCATTAAGGTGATCCAAGGAGGTCCACAAGAGACCCAAGAGCTACTAGAACAAAGATGGGACAAAATCTTCTTCACAGGAAGTGCTCGAGTGGGGCGGATTGTTATGTCTGCTGCTGTGAAGAATTTGACTCCTGTGACTTTGGAGTTGGGTGGAAAATGCCCTGCGGTTGTTGACTCCCTTTCATCTTCTTGGGATTTAGAGGTCACTGTGAAGAGAATTATTGTGGGAAAATTTGGGACTTGTGCTGGTCAAGCATGCATATCAATTGATCATGTTCTTGTGGAAAAGGGGTACTGTTCAAAACTGGTGGAATTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCTCAACATTCCAATACTATTGCCAGGATAGTGAACAAACACCACTTCTCTAGATTGAAGAATCTTCTTGCTGATAAAATGGTCAAAGAATCTGTGGTTTATGGTGGTTCAATGGACGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCCCCACTGGAAGCAGAAATTATGTCTGAGGAGATTTTTGGCCCATTGCTTCCAATTATTACTGTAGAGAAGATTGAGGACACTATTAAATTCATCAATAGTAGGCCTAAGCCTCTTGCCCTATATGTTTTCACCAAAAACAAAACCCTAGAGAAAAGAATGGTTTCTGAAACATCATCTGGCAGTGTCACTTTCAATGATGCAATTCTACAATATGCAGCTGATAGTCTCCCATTTGGAGGAGTGGGAGAGAGTGGGTTTGGCAGGTACCATGGGAAGTTCTCCTTTGACACATTTAGCCACCAGAAGGCAATACTAAGAAGAAGTTTCCTCACTGATTTTTGGTTTAGATATCCTCCATGGACACTAAATAAGTTGCGGCTACTTGAAGCCTCTTACAATTATGATTATCTGGGGTTTCTCCTTATCTTGCTGGGCTTAAAGAGATCATCAAAACGCTTACTAGCAAATCATGATTAG 1482 0.4211 MEIMSTLKRDLNDMREYYESGMTKQASWRESQLKGLRCFLMEKQDLIMETLMQDLGKHQLEAFRDEIGTLIKTLNLALKSLKGWMSGKKAELPQIALLTSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTAILKPSELSPACSSLLASSLTTYLDNKAIKVIQGGPQETQELLEQRWDKIFFTGSARVGRIVMSAAVKNLTPVTLELGGKCPAVVDSLSSSWDLEVTVKRIIVGKFGTCAGQACISIDHVLVEKGYCSKLVELMKVWIKKMFGENPQHSNTIARIVNKHHFSRLKNLLADKMVKESVVYGGSMDEENLFIEPTILVDPPLEAEIMSEEIFGPLLPIITVEKIEDTIKFINSRPKPLALYVFTKNKTLEKRMVSETSSGSVTFNDAILQYAADSLPFGGVGESGFGRYHGKFSFDTFSHQKAILRRSFLTDFWFRYPPWTLNKLRLLEASYNYDYLGFLLILLGLKRSSKRLLANHD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02360 493 PANTHER ALDEHYDE DEHYDROGENASE 4 480 IPR012394 GO:0006081
Spst2g02360 493 FunFam Aldehyde dehydrogenase 216 419 - -
Spst2g02360 493 Pfam Aldehyde dehydrogenase family 25 439 IPR015590 GO:0016491
Spst2g02360 493 SUPERFAMILY ALDH-like 14 456 IPR016161 GO:0016491
Spst2g02360 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Spst2g02360 493 PIRSF ALDH 1 476 IPR012394 GO:0006081
Spst2g02360 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Spst2g02360 493 FunFam Aldehyde dehydrogenase 15 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02360 Spst-Chr2 23128461 23131239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02360 1 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.719 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02360 K00128 - gmx:100784210 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00386 5 3172401 3175187 Spst2g02360 2 23128461 23131239 PCT