Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02353 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGCCTTCCCACATGAAATCAAACCTCCATGATTTGTCTGATAATGATGATGATGGGAAGAGGAATGAGAAGGATCCTTGGGGAGGGTTCAGTGAGTACAGTTTGGATCAGCTGAGAGTTGCCACCTCAGGATTTTCACCAGACAACATTGTCTCGGAACACGGTGAGAAAGCTCCAAATGTTGTCTACAAAGGGAGGCTTGAAGATGATAAGTTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCATAGAGGAGGCACGTGCTGTGGGGCAACTGAGGAATGAAAGATTGGCCAACTTGGTTGGGTGTTGTTGCGAGGGAGAAGAAAGATTGCTTGTTGCAGAGTTCATGCCCAATGAAACTCTTTCTAAACATCTTTTTCATTGGGAAGCCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCTCAAGCTTTGGAATACTGCAGCAGTAAAGGAAGGGCATTGTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGGGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACACCTCCAGAGTACTTGAGGACAGGAAGAATCACTGCTGACAGTGTAGTTTACAGTTTTGGCACCCTATTGCTTGATCTTCTGAGTGGAAAGCATATCCCACCTAGCCATGCACTTGACCTTATACGAGGCAAAAATTTTCTGTTGCTGATGGACTCATGTTTGGAAGGCCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTAGAGTATGAACCTCGTGAGAGACCAAATGTTAAGTCACTTGTGACTGCTTTGACCCCTCTTCAGAAAGAAACTTCGGTACCGTCATATGTTTTAATGGGCATACCAGATAGGAGTCTGTCATCAGAGGAAACAGTTTCATTAACACCTTTTGGTGACGCTTGTTCCAGAAGAGATCTGACTGCAGTACATGAGATTTTGGATAAGGTGGGCTACAAGGATGATGAAGATGTTGCGAATGAGCTTTCTTTCCAAATGTGGACAAATCAAATACAAGAAACTCTAAATTCTAAGAAGCAAGGTGATTCTGCTTTCCATGCTAGAGACTTATCTACAGCCATCGACTGCTATACACAATTCATCGATGGTGGAACCATGGTGTCACCTACCGTGTATGCCAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCAATATCTCCCACCTGGCCCACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGCCTTAAAGATGGAACAACACTGGAAACCAGGAAGTATAGAAACTGA 1479 0.4422 MGARCSKFSLCWWPSHMKSNLHDLSDNDDDGKRNEKDPWGGFSEYSLDQLRVATSGFSPDNIVSEHGEKAPNVVYKGRLEDDKLVAVKRFNKSAWPDSRQFIEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITADSVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLEYEPRERPNVKSLVTALTPLQKETSVPSYVLMGIPDRSLSSEETVSLTPFGDACSRRDLTAVHEILDKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFHARDLSTAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02353 492 Gene3D Transferase(Phosphotransferase) domain 1 137 328 - -
Spst2g02353 492 Gene3D Tetratricopeptide repeat domain 385 491 IPR011990 GO:0005515
Spst2g02353 492 ProSiteProfiles Protein kinase domain profile. 60 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02353 492 SUPERFAMILY Protein kinase-like (PK-like) 39 318 IPR011009 -
Spst2g02353 492 FunFam probable serine/threonine-protein kinase At4g35230 385 492 - -
Spst2g02353 492 Pfam Protein tyrosine and serine/threonine kinase 73 311 IPR001245 GO:0004672|GO:0006468
Spst2g02353 492 SUPERFAMILY TPR-like 391 482 IPR011990 GO:0005515
Spst2g02353 492 Gene3D Phosphorylase Kinase; domain 1 31 135 - -
Spst2g02353 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 11 491 IPR045845 GO:0004672|GO:0009742
Spst2g02353 492 FunFam probable serine/threonine-protein kinase At4g35230 32 135 - -
Spst2g02353 492 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02353 Spst-Chr2 23042688 23046199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02353 45 340 Glycoside Hydrolase AT3G07070 33.841 2.06e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Spst2g02353 PK_Tyr_Ser-Thr 7.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02353 - - gmx:732542 950.658