Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g02353 | ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGCTGGTGGCCTTCCCACATGAAATCAAACCTCCATGATTTGTCTGATAATGATGATGATGGGAAGAGGAATGAGAAGGATCCTTGGGGAGGGTTCAGTGAGTACAGTTTGGATCAGCTGAGAGTTGCCACCTCAGGATTTTCACCAGACAACATTGTCTCGGAACACGGTGAGAAAGCTCCAAATGTTGTCTACAAAGGGAGGCTTGAAGATGATAAGTTGGTTGCTGTGAAGCGCTTCAACAAGTCTGCTTGGCCTGATTCTCGACAATTCATAGAGGAGGCACGTGCTGTGGGGCAACTGAGGAATGAAAGATTGGCCAACTTGGTTGGGTGTTGTTGCGAGGGAGAAGAAAGATTGCTTGTTGCAGAGTTCATGCCCAATGAAACTCTTTCTAAACATCTTTTTCATTGGGAAGCCCAGCCTATGAAATGGGCAATGAGGCTGAGGGTGGCCTTGTATTTAGCTCAAGCTTTGGAATACTGCAGCAGTAAAGGAAGGGCATTGTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAGGAAGGCAACCCTAGACTCTCTTGTTTTGGACTCATGAAAAACAGTAGGGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACACCTCCAGAGTACTTGAGGACAGGAAGAATCACTGCTGACAGTGTAGTTTACAGTTTTGGCACCCTATTGCTTGATCTTCTGAGTGGAAAGCATATCCCACCTAGCCATGCACTTGACCTTATACGAGGCAAAAATTTTCTGTTGCTGATGGACTCATGTTTGGAAGGCCATTTTTCAAATGATGATGGAACTGAGTTAGTGAGATTAGCTTCACGTTGTTTAGAGTATGAACCTCGTGAGAGACCAAATGTTAAGTCACTTGTGACTGCTTTGACCCCTCTTCAGAAAGAAACTTCGGTACCGTCATATGTTTTAATGGGCATACCAGATAGGAGTCTGTCATCAGAGGAAACAGTTTCATTAACACCTTTTGGTGACGCTTGTTCCAGAAGAGATCTGACTGCAGTACATGAGATTTTGGATAAGGTGGGCTACAAGGATGATGAAGATGTTGCGAATGAGCTTTCTTTCCAAATGTGGACAAATCAAATACAAGAAACTCTAAATTCTAAGAAGCAAGGTGATTCTGCTTTCCATGCTAGAGACTTATCTACAGCCATCGACTGCTATACACAATTCATCGATGGTGGAACCATGGTGTCACCTACCGTGTATGCCAGGCGCTGCTTATGCTACCTGATGAATGACATGGCACAAGAAGCACTTGGAGATGCCATGCAAGCTCAATCAATATCTCCCACCTGGCCCACTGCATACTATCTTCAAGCAGCTGCTCTCTTCAGCCTTGGCATGGACAATGATGCACAGGAAAGCCTTAAAGATGGAACAACACTGGAAACCAGGAAGTATAGAAACTGA | 1479 | 0.4422 | MGARCSKFSLCWWPSHMKSNLHDLSDNDDDGKRNEKDPWGGFSEYSLDQLRVATSGFSPDNIVSEHGEKAPNVVYKGRLEDDKLVAVKRFNKSAWPDSRQFIEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITADSVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLLLMDSCLEGHFSNDDGTELVRLASRCLEYEPRERPNVKSLVTALTPLQKETSVPSYVLMGIPDRSLSSEETVSLTPFGDACSRRDLTAVHEILDKVGYKDDEDVANELSFQMWTNQIQETLNSKKQGDSAFHARDLSTAIDCYTQFIDGGTMVSPTVYARRCLCYLMNDMAQEALGDAMQAQSISPTWPTAYYLQAAALFSLGMDNDAQESLKDGTTLETRKYRN | 492 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g02353 | 492 | Gene3D | Transferase(Phosphotransferase) domain 1 | 137 | 328 | - | - | |
Spst2g02353 | 492 | Gene3D | Tetratricopeptide repeat domain | 385 | 491 | IPR011990 | GO:0005515 | |
Spst2g02353 | 492 | ProSiteProfiles | Protein kinase domain profile. | 60 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g02353 | 492 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 318 | IPR011009 | - | |
Spst2g02353 | 492 | FunFam | probable serine/threonine-protein kinase At4g35230 | 385 | 492 | - | - | |
Spst2g02353 | 492 | Pfam | Protein tyrosine and serine/threonine kinase | 73 | 311 | IPR001245 | GO:0004672|GO:0006468 | |
Spst2g02353 | 492 | SUPERFAMILY | TPR-like | 391 | 482 | IPR011990 | GO:0005515 | |
Spst2g02353 | 492 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 135 | - | - | |
Spst2g02353 | 492 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 11 | 491 | IPR045845 | GO:0004672|GO:0009742 | |
Spst2g02353 | 492 | FunFam | probable serine/threonine-protein kinase At4g35230 | 32 | 135 | - | - | |
Spst2g02353 | 492 | FunFam | probable serine/threonine-protein kinase At5g41260 | 137 | 328 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g02353 | Spst-Chr2 | 23042688 | 23046199 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g02353 | 45 | 340 | Glycoside Hydrolase | AT3G07070 | 33.841 | 2.06e-41 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Spst2g02353 | PK_Tyr_Ser-Thr | 7.2e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g02353 | - | - | gmx:732542 | 950.658 |