Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02335 ATGGAATCTGATCATGATCATCACCAAACAGCAATATCTGAAAATCCCTCTGATGGAGAGGACCAAGGTGCAACTCACGTGACATCCAGGTCCTACGAGTGCAACTTCTGCAGGAGGGGATTCTCTAATGCACAAGCACTGGGGGGACACATGAACATCCACAGGAAAGACAAGGCCAAGCTCAAGCAACAACAATCTTCAAACCAAACTCAAGTTCAACCATCTTTGGACAAGGTTGTTGTCTCTCCACAGGATCAGACCAAGTCTGGTGAAGAACCCAACACACCAAATTGGAATTGGAATGTGTCTCAACAAGATCATGTTTCCTCTAGACCCACTCACACAAGGCAGCTTCCACTCTTTGCAGAATCACCAACTAGCAGTGAAACAATAAAGCCACAAGGTCGAAATACCACTGAAGGAGCTTTGCTATCTACCCGAGATTCATCATTAGAGTTAGACCTTGAACTGAGACTGGGAACTGAACCACAGGATTCATCATCAGCAGAAACGGGTACAAGAAATTTTTTTTGA 534 0.4476 MESDHDHHQTAISENPSDGEDQGATHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKLKQQQSSNQTQVQPSLDKVVVSPQDQTKSGEEPNTPNWNWNVSQQDHVSSRPTHTRQLPLFAESPTSSETIKPQGRNTTEGALLSTRDSSLELDLELRLGTEPQDSSSAETGTRNFF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02335 177 PANTHER OS07G0101800 PROTEIN 9 163 - -
Spst2g02335 177 SUPERFAMILY beta-beta-alpha zinc fingers 29 59 IPR036236 -
Spst2g02335 177 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Spst2g02335 177 MobiDBLite consensus disorder prediction 63 146 - -
Spst2g02335 177 Gene3D Classic Zinc Finger 18 93 - -
Spst2g02335 177 MobiDBLite consensus disorder prediction 56 148 - -
Spst2g02335 177 MobiDBLite consensus disorder prediction 1 28 - -
Spst2g02335 177 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02335 Spst-Chr2 22754580 22755113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02335 11 64 C2H2 Transcription Factor Family AT3G09290 62.963 1.37e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g02335 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02335 - - vun:114170729 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02335 2 22754580 22755113 Spst2g02335 2 22754580 22755113 ECH