Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02326 ATGGGGGAAGAGGTGAAGACGAGCGAGTACGACGAAGAGCGCGTCATGGAGTGGGAGGTGGGTCTCCCCACCGCCAACGATCTCACGCCTCTCTCACAGCCGCTGATTCCGCCGGAGCTGGCCTCCGCCTTCAGCATCTCTCCGGAGCCGCACCGCACCGTCCTCGACGTCAACCGCGCCTCGCGCAACACGCTCTCCACTCTCCGCGGTGGCGGGAGTGTACACCAGGCCTTCTCCTCCTCCAACAACCACCAACACCACGAGGAGGAGGACGAGGACGAGGAGGATGATACCGATCGCGACGGCTCGGGGTCGGATTCCAGGAAGCATCGGAAGATCGAGTGCGTGGCGGAGGAGGCTGACTCGGCGGTGCGGACGGATAACTCGGCGGAGCGGACGGCGGTGAAGCGGCCGCGGCTGGTGTGGACCCCGCAGCTGCACAAGCGGTTTGTGGACGTGGTGGCGCACCTTGGGATCAAGAACGCAGTGCCGAAGACTATTATGCAGTTGATGAACGTGGAAGGGTTGACCCGCGAGAATGTGGCGAGCCATCTTCAGAAGTATCGGCTTTACCTGAAGCGGATGCAGGGTCTCTCCAACGAAGGTCCTTCTTCATCGGATCAGTTATTCGCTTCCACACCTGTGCCTCAGAGTTTGCACGAGTCTGCTCCTCCCAGTGCCCATTCCCATGGTCACTCCCATGGCCATGCCAATGCTCATCTCCCCGTTCCCATGATGTCCATGCCCTATCCCCCTCCCATGATGTCGATGCCTGTCCTCGGCATGCCCCATGCCCATGGCCACATGGGCCTCCCCATGCCCACTTCTTCCGCCACCTCCGCTTACCATCCTTACAACATGCTTCACCAAAGGGATTGGGCTCACCTTGCTCCTAATGATAAATGA 906 0.6071 MGEEVKTSEYDEERVMEWEVGLPTANDLTPLSQPLIPPELASAFSISPEPHRTVLDVNRASRNTLSTLRGGGSVHQAFSSSNNHQHHEEEDEDEEDDTDRDGSGSDSRKHRKIECVAEEADSAVRTDNSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHESAPPSAHSHGHSHGHANAHLPVPMMSMPYPPPMMSMPVLGMPHAHGHMGLPMPTSSATSAYHPYNMLHQRDWAHLAPNDK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02326 301 MobiDBLite consensus disorder prediction 65 112 - -
Spst2g02326 301 MobiDBLite consensus disorder prediction 65 81 - -
Spst2g02326 301 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 270 IPR044841 GO:0003700|GO:0006355
Spst2g02326 301 SUPERFAMILY Homeodomain-like 135 194 IPR009057 -
Spst2g02326 301 MobiDBLite consensus disorder prediction 198 240 - -
Spst2g02326 301 MobiDBLite consensus disorder prediction 198 224 - -
Spst2g02326 301 Gene3D - 133 196 - -
Spst2g02326 301 FunFam Two-component response regulator 133 196 - -
Spst2g02326 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 134 193 IPR017930 -
Spst2g02326 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 138 190 IPR006447 GO:0003677
Spst2g02326 301 Pfam Myb-like DNA-binding domain 141 189 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02326 Spst-Chr2 22672808 22673713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02326 1 216 G2-like Transcription Factor Family AT3G46640 61.538 9.44e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst2g02326 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02326 - - gmx:100816634 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02326 2 22672808 22673713 Spst2g02326 2 22672808 22673713 ECH