Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02317 ATGCTCAACACAGATTCCCTTTTAGATCATTTTCCTGGTTCCATCAATGGTTTCATATTTGAAAACGGTCCTGTCTCGGTGTTTGTGAATCAGGCAAATGAGTTCAAGTTTGATGATTCAATTTCCCCTGCAGAATCTGCATCTGATTCTGCTCCCTCTTCTGGGACAGGTTCTAATGGAGAACATGCAGAGAGTACTAAACACTCCAATCCTATTCTCAGGTACATAAGTGATATTCTCATGGATGAAGAGGATAATTTAGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAGGCTGCTGAAAAATCATTCTATGATGCGTTGATTCATAGCCACCCTTCATCACCTCATCAGTTTAATGATAACCCCGACCCAGATGATAATTTTGGTCGAACCACTAGTTCTGAGAGTTATAGCAGTAATACCACTGATAATTCATGTGAGTCTGATTGGTTTAACGGTGCTGGTGATTTTGAGTCTGCTTTCCTACAAAGATCTCTGCATAACTCCCCTGACCATGTTTATGTTGTTCCTGATCTGATTAGAGAGGCGCACGCTGGGGTCCATGTCTCAAATGGAGCCTGGAATTTGATTCACTCGCAGAACAAGCCAGGCGTGATTGAAGAGGGCGTGACGAGGACAGTCAAAGGATCAAGGGAGAAGAGGAGCCATCTCATGAATGATGTCTCACATGAAGAGGAGGAGAGAAGAAATAAGCTTTCAGCTGTCTTTTCTGATGATTCGGAGCCATCCAGCCTGTTCGATGAGGTGCTGCTTTGCAAGGATGGCAAGAGTCCAGCCATTTTTAAGTCCGAGTCTGGAGGATCTAATGGAAAGACAACACGTTCGAAGAAAGGTTCCAACAAGGGAACAAGTGCAAGAACAACGGTGGATTTATGGACTTTGCTATCTCAATGCGCACAAGCTGTGGCTAGCTTTGACCCAAGGACTGCAAATGAAATACTCAAGCAGATTAGGCAGCACTCTTCACCTTTGGGCGATGGACTTCAGCGTTTGGCTCACTACTTTGCCGATGGCCTCGAGACAAGGTTAGCTGCTGGGACACCAACGTTCATGCTCTTGCAGTCACCATCTGCTGCAGATATGTTAAAAGCTTACCGAGTGTATGTCACAGCAGCACCATTTCACAGGATGTCGAATTTCTTGGCTAACCGTACTATTTTGAAGTTATCACAAAGTGAAAGCAGTGTTCACATTATTGACTTTGGGATTAGCTATGGTTTCCAGTGGCCGTGCCTCATCCAACGGCTTTCAGAGAGGGCAGGTGGTCCTCCGAGGCTTCGGATAACAGGAATCGATCTTCCTCAGCCAGGATTTAGGCCAGCAGAAAGGGTTGAGGAGACGGGGCGGCGTCTAGAGAAGTACTGCAAGAGGTTTGGAGTCCCATTTGACTACAATTGCCTTGCTCAGAAATGGGAAACTGTAAGACTTGAGGACCTCAAACTTGATAGGAGTGAAGTAACCGTGGTTAACTGTTTGTACAGATTGAAGAACCTGTCTGATGAAACTGTGACTGCAAACTGTCCAAGAGATGCTGTGTTGAGGTTGATCAGGAGGATCAATCCAACCATCTTCATGCATGGGGTTGTCAATGGCACCTACAATGCACCATTTTTCCTGACAAGGTTCAGGGAAGCACTTTTCCACTTCTCAGCATTGTTTGATTTGTTTGAAGCTAACGTGCCTCGGGAAGATCCATCCAGGCTTATGTTTGAGAAAGGGTTGTTTGGAATGGACGCAATCAATGTCATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAATGGCAAGTTAGGAACCAGAGAGCAAGGTTCAAACAACTTCCATTGGCCACAGAGCTCGTGGATAGAGTGAAGAAAATGGTGAAGAAGGAATATCATAAAGATTTTACTGTTGATGAGAATGGCAAGTGGGTTTTGCAAGGATGGAAAGGACGTATTCTATTTGCAATTTCTTCTTGGGTTCCTGCTTGA 2019 0.4527 MLNTDSLLDHFPGSINGFIFENGPVSVFVNQANEFKFDDSISPAESASDSAPSSGTGSNGEHAESTKHSNPILRYISDILMDEEDNLERKPCMLQDCLRLQAAEKSFYDALIHSHPSSPHQFNDNPDPDDNFGRTTSSESYSSNTTDNSCESDWFNGAGDFESAFLQRSLHNSPDHVYVVPDLIREAHAGVHVSNGAWNLIHSQNKPGVIEEGVTRTVKGSREKRSHLMNDVSHEEEERRNKLSAVFSDDSEPSSLFDEVLLCKDGKSPAIFKSESGGSNGKTTRSKKGSNKGTSARTTVDLWTLLSQCAQAVASFDPRTANEILKQIRQHSSPLGDGLQRLAHYFADGLETRLAAGTPTFMLLQSPSAADMLKAYRVYVTAAPFHRMSNFLANRTILKLSQSESSVHIIDFGISYGFQWPCLIQRLSERAGGPPRLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFGVPFDYNCLAQKWETVRLEDLKLDRSEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPTIFMHGVVNGTYNAPFFLTRFREALFHFSALFDLFEANVPREDPSRLMFEKGLFGMDAINVIACEGAERVERPETYKQWQVRNQRARFKQLPLATELVDRVKKMVKKEYHKDFTVDENGKWVLQGWKGRILFAISSWVPA 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02317 672 MobiDBLite consensus disorder prediction 114 149 - -
Spst2g02317 672 ProSiteProfiles GRAS family profile. 293 670 IPR005202 -
Spst2g02317 672 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 236 664 IPR005202 -
Spst2g02317 672 MobiDBLite consensus disorder prediction 273 295 - -
Spst2g02317 672 MobiDBLite consensus disorder prediction 116 149 - -
Spst2g02317 672 MobiDBLite consensus disorder prediction 272 295 - -
Spst2g02317 672 MobiDBLite consensus disorder prediction 41 68 - -
Spst2g02317 672 Pfam GRAS domain family 304 669 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02317 Spst-Chr2 22522886 22524904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02317 11 671 GRAS Transcription Factor Family AT2G29060 43.924 2.01e-180 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g02317 GRAS 4.9e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02317 - - gmx:100815586 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00412 5 3290375 3292375 Spst2g02317 2 22522886 22524904 PCT