Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02308 ATGAAGTGCTTCTACTTCTCCAATGCAGAAGACGAAGATTGCGTGGCAGCGGCACCGAGTTCGCGCGGTTCCACTTCGCGCGTGTCGTGGGCGCGTTCGCTCAGTCTCATGGACACGCGCAGTCGCTCCAACTTCGACTCCGACTCCACGGAATTCTCCGACACCGTGGACTTTCACCACTTCCTGGTCCAGCGCCGTGCCAACGACCTCCGCCTCTTCCCCTTCTCCGCGCTGAAGTGCGCCACGCGCGGGTTCAGCCGCACTCTCCTCGTCGGCGAGGGGGGGTTTGGGTCTGTGTACCGTGGCGTGGTGGAGGAAAAGGAGGTGGCGATCAAGCAGCTGAACCGAAACGGGCAGCAGGGGCACAAGGAGTGGATCAACGAGGTGAATTTGTTGGGAGTGGTGAAGCACCCTAATCTGGTGCGGTTGGTAGGGTACTGTGCCGAGGACGATGAAAGAGGGATTCAGAGGCTTCTGGTTTACGAGTTTATGCCGAATAAGAGCTTGGAGGAGCATCTATTGGTGCGAGTCCCTTCCACGGTTCTGCCTTGGGGGACCAGGTTGAGAATTGCGCAAGATGCGGCTCGCGGTTTGGCCTATCTTCATGAAGAAATGGATTTTCAGCTAATATTTCGGGATTTTAAGACGTCCAACATCCTGCTGGATGAGAATTTCAATGCAAAGCTTTCTGATTTTGGACTGGCTAGGCAAGGACCTTCAGAAGGGTCTGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGTTATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTAACTGCTAAGAGTGATGTTTGGAGCTTTGGTGTAGTTCTTTTTGAGCTTATCACCGGGAGGAGAGCTGTAGAGAGAAACCTTCCTAAAAGCGAACAAAAGCTTTTGGAGTGGGTTAGACCCTATGTTTCTGATCATAGGAAGTTGCATCATATTGTAGACCCCCGACTTGAGGGACAATACTGCATCAAATCAGCTCAGAAACTTGCAATCCTAGCAAACAAGTGCCTCATGAAACAGCCAAAGTGTCGCCCAAAAATGAGTGAGGTGGTCGATTCCCTTGGAAGCATTATTATAGAGACAGTTACTGAAGAAGAATGCTTCCCCCAAGGTGCTGTAGCCACTGGAGAAGAAAAAGAAGAGAAGGTGTCTGTAGAGGAAATTGAACCTGAACCAGCTAAACAAGGGAACAATTACCTGAAGAAGGTTTTTGAATTCAAAGACATTGTCAGCTTAAGAAACAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCGCCTGGGCTAGTAAGAAGTTGGTGA 1320 0.503 MKCFYFSNAEDEDCVAAAPSSRGSTSRVSWARSLSLMDTRSRSNFDSDSTEFSDTVDFHHFLVQRRANDLRLFPFSALKCATRGFSRTLLVGEGGFGSVYRGVVEEKEVAIKQLNRNGQQGHKEWINEVNLLGVVKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEEHLLVRVPSTVLPWGTRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDENFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLFELITGRRAVERNLPKSEQKLLEWVRPYVSDHRKLHHIVDPRLEGQYCIKSAQKLAILANKCLMKQPKCRPKMSEVVDSLGSIIIETVTEEECFPQGAVATGEEKEEKVSVEEIEPEPAKQGNNYLKKVFEFKDIVSLRNKSIGRLDWKSWAPGLVRSW 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02308 439 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Spst2g02308 439 Gene3D Phosphorylase Kinase; domain 1 64 163 - -
Spst2g02308 439 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 59 163 - -
Spst2g02308 439 PANTHER OS01G0588500 PROTEIN-RELATED 50 362 - -
Spst2g02308 439 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 164 373 - -
Spst2g02308 439 Gene3D Transferase(Phosphotransferase) domain 1 164 377 - -
Spst2g02308 439 ProSiteProfiles Protein kinase domain profile. 85 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02308 439 Pfam Protein kinase domain 90 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02308 439 ProSitePatterns Protein kinases ATP-binding region signature. 91 112 IPR017441 GO:0005524
Spst2g02308 439 CDD STKc_IRAK 91 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02308 Spst-Chr2 22384205 22386603 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02308 71 361 Glycoside Hydrolase AT3G07070 50.680 3.61e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst2g02308 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02308 - - gmx:100305425 749.969