Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02307 ATGGCACGAGGGTATTATAAAATTAGGATAAATCGATATGGGACATGGATGAGAACAAGCAACAAGGTTGAAGGAATTAGTATTGCTTCTACCATGGGAGTTTGTTTTAGCACCAAAATTAAAGCAGGGTTAAATTCAAAGCATGACAATGCCGATACAAAAGATCTCAGCAGTCCAAGTAGTAAAATTACAGAAGATCTCAGTAGCACAATTAGTAAGGTCTTAGAGGTTTCGGTGCCTCAGACTCTTCAGAGTGAGGGTGAGATCTTGCACTCATCCAATCTAAAGAACTTTAGTTTGACAGAACTTACAGCTGCTACAAGAAATTTCCGTAAGGACAGTGTGCTAGGAGAGGCTGGTTTTGGATCAGTTTTTAAGGGCTGGATTGATGATCACTCGCTCTCTGCTGCCAAACCTGGCACGGGCATTGTTGTTGCAGTGAAAAGACTTGGCCAGGATAGCTTCCAAGGTCACAAGGAGTGGTTGGCAAGGCGCGGTATGACTTATGAAGCAAGTCTCGAGGATGAAGTAAACTATCTAGGCCAGCTTTCTCATCCTCATCTAGTGAAACTAATTGGGTATTGCTTTGAAGATAGAGACCGCCTACTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTTCACCCTATTTCTTGGGGGCTGCGTTTGAAAGTCGCTTTCGGTGCTGCCAAAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATCGAGATTTCAAGACTTCGAATGTATTGCTGGATTCAAATTATAACGCAAAGCTTGCTGATTTGGGGTTGGCAAAGGACGCACCTACACTTGACAAAAGTCATGTTTCCACCAGAGTAATGGGAACCTACGGATATGCAGCTCCAGAATACCTAGCCACAGGTCATGTGAGCGCAAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGCTAGAACTGTTATCTGGCAGGAGGGCTGTGGACAAGAACAGACCATCAGGACAGCACAATTTGGTGGAGTGGGCAAAGCCATACTTAGCAAACAAGAGAAAGATTTTGCGTGTGTTGGATAACCGTCTTGAAGGCCAATATGATGTAGATGATGCTTTGAAGGTAGCTACTCTAGCTCTGCGATGCCTCGCAACAGAATCCAAGTTGAGACCAACGATGGACGAGGTTGTCAAAGATTTGGAGCAGCTGCAGGTTCCCCATGTACATCATAATCGTTCTCTGAATACCTCTCGTGGTCGTAGAAAAAGTGCTGATGATTTTACCCATGGTAGAATCGCTACAGCTTTAGTTTCCCCTCTCTCACGTGACATTGCAAATACACGTCCTTGA 1362 0.4413 MARGYYKIRINRYGTWMRTSNKVEGISIASTMGVCFSTKIKAGLNSKHDNADTKDLSSPSSKITEDLSSTISKVLEVSVPQTLQSEGEILHSSNLKNFSLTELTAATRNFRKDSVLGEAGFGSVFKGWIDDHSLSAAKPGTGIVVAVKRLGQDSFQGHKEWLARRGMTYEASLEDEVNYLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFHPISWGLRLKVAFGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLGLAKDAPTLDKSHVSTRVMGTYGYAAPEYLATGHVSAKSDVFSFGVVLLELLSGRRAVDKNRPSGQHNLVEWAKPYLANKRKILRVLDNRLEGQYDVDDALKVATLALRCLATESKLRPTMDEVVKDLEQLQVPHVHHNRSLNTSRGRRKSADDFTHGRIATALVSPLSRDIANTRP 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02307 453 Pfam Protein tyrosine and serine/threonine kinase 113 404 IPR001245 GO:0004672|GO:0006468
Spst2g02307 453 SUPERFAMILY Protein kinase-like (PK-like) 88 408 IPR011009 -
Spst2g02307 453 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 208 418 - -
Spst2g02307 453 PANTHER OS01G0588500 PROTEIN-RELATED 63 408 - -
Spst2g02307 453 ProSiteProfiles Protein kinase domain profile. 110 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02307 453 Gene3D Transferase(Phosphotransferase) domain 1 208 427 - -
Spst2g02307 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Spst2g02307 453 Gene3D Phosphorylase Kinase; domain 1 85 207 - -
Spst2g02307 453 FunFam Serine/threonine-protein kinase BIK1 77 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02307 Spst-Chr2 22373728 22382388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02307 87 431 Receptor kinase-like Gene Family AT4G02010 45.042 5.50e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst2g02307 PK_Tyr_Ser-Thr 8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02307 - - vun:114169806 710.294