Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02303 ATGGCCATGGAGGAGTATGAAAGTGATGAGAAGGTCCACGTGGCAGTTGGGAAGTCCCTGAAGAAAGCCACCACTTTGCTGCAATGGTGTTTCACCCATTTCAGCAAAGCACAGATATGTTTGATTCATGTTTACCAACCTTCTACTATGATCCCTACACTCTTAGGAAAATTGCCAGCATCCCAAGCTAGTCCTGAAGTCGTGTCTGCTTATAGAATGGAGGAAAGAGAAGATACCAAGAGGCTTCTGGAGAAGTACTTGAGCCTTTGCCGTGCAGCTAAGGTTAAGGCAAGTAGTGTCATTGGTGAAGCTGATCAAGTCCAGAAAGGGATAGTAGATTTGGTTACTGTGCATAATATCAGGAAACTTGTTATTGGAGCAATACCCCGAGAAAATTGCGTGAAAGTCAAAAGGAATTCCAGAAAAGCAAACTTTGCTGCGAAAAATGCTCCCCCATTCTGTGAAATATGGTTTGTCTACAAAGGCAGACACATTTGGACAAGAAAAGCTTCTGAAACTCCGTGTTTTGTGTCTTCCCATGCTCAAACTGAGACTACAACCGTAGAGAGCTTGAGCCGTAGATCTTTTCAATATGGTACAAATGAATTATTCCATTCAGAATGTCTTCAATCAAATTCTACAAGGACTACAAGACGTACAGTTCAGAGTGAAATCATTGAAGCTGAAGCTACTTTTTCATCCAAATCACCCAGTTGTAATAGTCATTGTTCTCCCCAACATTCAGCCGGTTGGTATTTAGATACTCATTCAGAGTTTGAGGAAGAACCAATTGACAGCCAACTTATTGAAGCTAAAGGAGAAGCTAATCCTGCAACAGACAAGGAACCTGTGGAGCTGTTGAAGTGCAAAAGGTTGGAACTCCAAGCCACTGAGGCCATTAGTAAGAAGCCTATTCTCCTTGTTCCTATTGCAAGGAAAGCTGCCAGACAGATTCTTGCTTGTCATGAGGGATCAAATATACTTTTTTATCATAACTATGAAGCCTCAAGAGAAAATCCATCTGAAAGATACTTGGATTCTGTCAACTTGTTTGAATCTGCCTGCGCACATGAGGCAAAGCTCAGAAAAGAGGTTGAGGCTGCAGTGAGAGCTACAATACAGGAGCAACAGATGCTCTTGGAGGAGAAAGAAGAAATTGCTAGTGAACTCGAAAGGACCAAAAGAGCTAGTATCCTTCTAGCCAATTGTGCACATGAAACCAACCGTAGGCGAGATGAAGCTGCAAATGAACTATCATTAATTCAAGCATCCTTCTCAAACCTGCAGCACGAAAAGCAGCAAATCAGGCGACAGAAAATAGAAGCCCTACACTGGCTTGAGCGGTGGAAAAGTTGTGGACATGTTGGAGCAGATCACTGCAATGGGATCATTGGGTTTGCTGAAGAATTTCCAGAGTTGGCAGAATTCTCATTATCAGATCTTCAAAACGCTACATGCAATTTTTCTGAGAGTTTCAAAGCTATGGAGGGTGGATATGGTTCTATATATAAGGGAGAAATGTTGGGTAGAACAGTTGCTATAAGGAAGCTCCATCCACACAACATGCATGGATCAAAACAGTTTCATCAAGAGGTCCGAGTTCTTGGTAGTCTCCAGCACCCTCATCTGGTTACTTTGCTTGGTGTTTGCCCTGAAGCTTGGTCATTTATATATGAGTACTATCCCAATGGAACTCTTCAAGATTACCTATCCCGAAAAGGAAATCTTCTGTCTCTGACTTGTAGTATCCGAGCACGATGGATTTCTGAGATTGCTAAAGTTCTCTGCTTCCTACATTCTTCCAAACCTGAAACTATTATCCACGGTGGTCTGACGCTTGAAACTGTCATTCTTGACACTGGCCTTAGTTGCAAGATATGTGACTTTGGGTTCAGCAGGCTGGTGAAAGAGGAGTCACTTTATCTTTCTAGTTTTCACTTAAGCAGTGAGCCAAAAGGTTCTTTCACATATACAGATCCTGAGTTTCAGAGAACTGGAGTACTAACACCTAAGTCTGACATATACTCTTTTGGACTCATCATTTTGCAACTCCTCACTGGTAGGACTCCAGTTGGATTAGCTGCTGAAGTACGCAGAGCAGTTTCATGTGGAATATTATCTTCAATTTTGGATTCTTCAGCTGGAGAATGGCATTCCACCGTGGCAACACGATTGGCTGAACTGGGATTGCAATGCTGCCAACTGAACAGTAGAGACAGACCAGAGTTAACACCTTCTCTAGTGAGAGAATTGGAGCTGTTGTATGTTTCAGAAGAGCGACCAGTGCCATCTTTTTTCTTGTGTCCAATCTTTCAGGAAATAATGCATGATCCTCAAGTTGCATCAGACGGATTTACTTATGAAAGGAAGGCCATAAGTGAATGGCTGGAAAATGGGCACGAAACTTCTCCTATGACTAACTTAAAATTGAGTCACCCGCATCTCACTCCCAATCATGCACTTCGACTTGCTATCCAAGGCTGGCTTTGCAAATCTTGA 2499 0.425 MAMEEYESDEKVHVAVGKSLKKATTLLQWCFTHFSKAQICLIHVYQPSTMIPTLLGKLPASQASPEVVSAYRMEEREDTKRLLEKYLSLCRAAKVKASSVIGEADQVQKGIVDLVTVHNIRKLVIGAIPRENCVKVKRNSRKANFAAKNAPPFCEIWFVYKGRHIWTRKASETPCFVSSHAQTETTTVESLSRRSFQYGTNELFHSECLQSNSTRTTRRTVQSEIIEAEATFSSKSPSCNSHCSPQHSAGWYLDTHSEFEEEPIDSQLIEAKGEANPATDKEPVELLKCKRLELQATEAISKKPILLVPIARKAARQILACHEGSNILFYHNYEASRENPSERYLDSVNLFESACAHEAKLRKEVEAAVRATIQEQQMLLEEKEEIASELERTKRASILLANCAHETNRRRDEAANELSLIQASFSNLQHEKQQIRRQKIEALHWLERWKSCGHVGADHCNGIIGFAEEFPELAEFSLSDLQNATCNFSESFKAMEGGYGSIYKGEMLGRTVAIRKLHPHNMHGSKQFHQEVRVLGSLQHPHLVTLLGVCPEAWSFIYEYYPNGTLQDYLSRKGNLLSLTCSIRARWISEIAKVLCFLHSSKPETIIHGGLTLETVILDTGLSCKICDFGFSRLVKEESLYLSSFHLSSEPKGSFTYTDPEFQRTGVLTPKSDIYSFGLIILQLLTGRTPVGLAAEVRRAVSCGILSSILDSSAGEWHSTVATRLAELGLQCCQLNSRDRPELTPSLVRELELLYVSEERPVPSFFLCPIFQEIMHDPQVASDGFTYERKAISEWLENGHETSPMTNLKLSHPHLTPNHALRLAIQGWLCKS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02303 832 Pfam U-box domain 762 831 IPR003613 GO:0004842|GO:0016567
Spst2g02303 832 SMART Ubox_2 765 828 IPR003613 GO:0004842|GO:0016567
Spst2g02303 832 Pfam Protein tyrosine and serine/threonine kinase 496 744 IPR001245 GO:0004672|GO:0006468
Spst2g02303 832 Gene3D Phosphorylase Kinase; domain 1 465 560 - -
Spst2g02303 832 ProSiteProfiles U-box domain profile. 761 832 IPR003613 GO:0004842|GO:0016567
Spst2g02303 832 CDD RING-Ubox_WDSUB1-like 763 818 - -
Spst2g02303 832 PANTHER OS02G0152300 PROTEIN 12 826 - -
Spst2g02303 832 SUPERFAMILY RING/U-box 759 831 - -
Spst2g02303 832 Gene3D HUPs 6 130 IPR014729 -
Spst2g02303 832 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 762 832 IPR013083 -
Spst2g02303 832 ProSiteProfiles Protein kinase domain profile. 488 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02303 832 Gene3D Transferase(Phosphotransferase) domain 1 561 761 - -
Spst2g02303 832 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 130 - -
Spst2g02303 832 SUPERFAMILY Protein kinase-like (PK-like) 472 755 IPR011009 -
Spst2g02303 832 Coils Coil 373 396 - -
Spst2g02303 832 CDD STK_N 11 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02303 Spst-Chr2 22334427 22348765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02303 9 829 U-box Gene Family AT2G45910 33.294 1.85e-144 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst2g02303 PK_Tyr_Ser-Thr 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02303 - - gmx:100799032 1306.97