Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02294 ATGGAGAGTGGAAACGAGGAGTTGGAGATGGGAGGGTCTAATGGGGTTGCAGCGAGCTCACGGTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAACCTGTATAAGCAGGGAATAAAGACTCCCAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGTGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCTAGGCAGAGACAGAAGCAGAAGCAAGAAACCATCGCTTACTTCAATCGCTTTCTTCATACTCCCCAGCCCTTTTCTTCTCCGCCAATTTGCCCAAATGGCCTGTGCCCCCCATATTGCATACCTCAGGCACAGAATGAAGTTGGGTTTTATCCCCCACATCCAAAGGTGCTTGTACCCGTAGGTTTTAGGAGGAGCCCATCTGAGATATTTGTGCCCACAGGCATGTCAAACACGATCAGCAATGGCCCGCTTGTATGCGATGGCATGCAACAGAGAATCTCGGATTGTAACTTCAGCTACAGTAACCAAGAAACGTTGGATCTCTTTCCTCTGCACCCAACTGGTATTTTGGAAGGGAAAACAACAGACCAGGTGTCTTCTCTGGCTTCAGTTTCTGCTGATAGCTCCACTGATACACCTTCTACGCCTTCTCCTGATATCAACGAAGATGATACTTCTCCACTAAACCAACCCTTTTTCGATTTTTTTACTACTTCTGGACAAGGTTCTTAA 738 0.4661 MESGNEELEMGGSNGVAASSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRVYGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHTPQPFSSPPICPNGLCPPYCIPQAQNEVGFYPPHPKVLVPVGFRRSPSEIFVPTGMSNTISNGPLVCDGMQQRISDCNFSYSNQETLDLFPLHPTGILEGKTTDQVSSLASVSADSSTDTPSTPSPDINEDDTSPLNQPFFDFFTTSGQGS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02294 245 SUPERFAMILY Homeodomain-like 20 86 IPR009057 -
Spst2g02294 245 SMART HOX_1 17 84 IPR001356 GO:0003677
Spst2g02294 245 MobiDBLite consensus disorder prediction 1 20 - -
Spst2g02294 245 CDD homeodomain 21 81 IPR001356 GO:0003677
Spst2g02294 245 FunFam WUSCHEL-related homeobox 4 19 86 - -
Spst2g02294 245 MobiDBLite consensus disorder prediction 198 245 - -
Spst2g02294 245 ProSiteProfiles 'Homeobox' domain profile. 15 80 IPR001356 GO:0003677
Spst2g02294 245 Gene3D - 19 87 - -
Spst2g02294 245 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 9 213 IPR044555 GO:0003700|GO:0099402
Spst2g02294 245 Pfam Homeodomain 19 79 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02294 Spst-Chr2 22154657 22156075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02294 15 239 Wox Gene Family AT5G59340 45.200 1.40e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Spst2g02294 Homeodomain 5.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02294 - - pvu:PHAVU_011G064900g 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02294 2 22154657 22156075 Spst2g02294 2 22154657 22156075 ECH