Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02279 ATGATTACTGAGTTCCTCTTGACAGTTCTCAGTTTCTTCCTCTCTGCTTTCCTTCTCAAACTCTTGTTTGAGAGAAGAAGAAAGCCCAGGGACCACTTCAAGCCCCCTCCAAGCCCACCAGCAATACCCGTAATCGGTCACCTCCATCTGCTTAAACCACTCATCCATCACGCGTTCCAAGAACTTTCTCTCCGATATGGGCCTCTTCTATGCCTTCGATTAGGTTCCGCAAAGTTCGTAGTTGCAAGCACCCCTTCACTCGCCAAAGAGTTTCTCAAGATCAACGAGCTCACATACTCTTCTCGAAAAATGAACATGGCCATTGACATGGTTACCTACCACAACGCCACGTTTGCGTTTGCCCCTTACGACACTTACTGGAAGTTCATGAAAAAGCTCAGCACCACTGAACTCTTGGGAAACAAAACCCTCGCGCAGTTCCTACCAATTCGGACAAGGCAAGTTCACGAATTCGTTCAAACTATATTCCACAAATCGAAGGCCGAAGCAAGTGTGAACCTCACTGAGTCACTCTTGAGGCTTTCCAACAACGTGATATCGCAGACGATGCTCAGCATCAAGAGCTCCGGAACAGACAGCCAGGCAGACCAGGCACGTGCGTTGGTTCGTGAAGTGACGCAGATTTTCGGTGAGTTTAACGTTTCCGATTTCATAGGTTTCTGCAAGAACTTGGATTTTCAAGGTTTCAAGAAGAGGGCATTGGACATACATAAGAGGTACGATTCTCTGCTAGAAAAGATCATCTCTGATCGTGAAGAACTAAGAGGGAAATCGAAGGTTGAAGGTCGTGAAGATGGAGACAATAGAGTGAAGGATTTTCTTGATATTTTGCTGGATGTTGCTGAGCAGAATGAATGCGAGGTTGAGTTAACTCGAAACCATATCAAATCATTGATCTTGTTTACAGCAGCTACCGACACAACTGCTATATCAGTGGAATGGGCGATAGCAGAACTGTTCAACAATCCAAAGGTGCTGGAGAAAGATCAAGAGGAGGTGGACAAAGTCACTGGAAACAAGAGATTAGTGTGTGAAGCAGACAGTTCTAACCTTCCTTACATCCATGCCATCATAAAAGAAACAATGAGGCTTCACCCGCCAATACCAATGATTATGAGGAAGGGAATCGAAGAATGTGTGGTTAATGGAAACATGATTCCAAAGGGTTCAATAGTCTGTGTAAACATTTGGGCTATGGGGAGGGATCCAAGTATCTGGGAGAACCCTTTATTGTTTAGGCCAGAAAGGTTTCTAGAAGATGAAGGAAGCAATGTGGATCTGAAAGGGCATCATTTTGAGTTGTTGCCATTTGGGAGTGGAAGGAGAGGGTGTCCTGGCATGCCTTTGGCCATGCGTGAATTGCCCACAATCATTGGAGCACTCATACAGTGTTTTGAGTGGAAGATGTTGGGTTCTCATGGTGAAATCTTAGAGCATGGTAGACGTAAAATCAATATGGATGAACGACCAGGGTTGACTGCTCCAAGGGCCAATGATCTTATATGCATTCCTGTTGCACGATTAAATCCTACTCTTTTTCAAGTGTAG 1569 0.4493 MITEFLLTVLSFFLSAFLLKLLFERRRKPRDHFKPPPSPPAIPVIGHLHLLKPLIHHAFQELSLRYGPLLCLRLGSAKFVVASTPSLAKEFLKINELTYSSRKMNMAIDMVTYHNATFAFAPYDTYWKFMKKLSTTELLGNKTLAQFLPIRTRQVHEFVQTIFHKSKAEASVNLTESLLRLSNNVISQTMLSIKSSGTDSQADQARALVREVTQIFGEFNVSDFIGFCKNLDFQGFKKRALDIHKRYDSLLEKIISDREELRGKSKVEGREDGDNRVKDFLDILLDVAEQNECEVELTRNHIKSLILFTAATDTTAISVEWAIAELFNNPKVLEKDQEEVDKVTGNKRLVCEADSSNLPYIHAIIKETMRLHPPIPMIMRKGIEECVVNGNMIPKGSIVCVNIWAMGRDPSIWENPLLFRPERFLEDEGSNVDLKGHHFELLPFGSGRRGCPGMPLAMRELPTIIGALIQCFEWKMLGSHGEILEHGRRKINMDERPGLTAPRANDLICIPVARLNPTLFQV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02279 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Spst2g02279 522 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 SUPERFAMILY Cytochrome P450 36 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 FunFam Cytochrome P450 family protein 27 509 - -
Spst2g02279 522 CDD CYP93 67 511 - -
Spst2g02279 522 Gene3D Cytochrome P450 21 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 Pfam Cytochrome P450 36 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02279 522 PANTHER STEROID 21-HYDROXYLASE-RELATED 13 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02279 Spst-Chr2 21921530 21923217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02279 30 514 Cytochrome P450 AT5G06900 41.718 4.30e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02279 K23179 - gmx:100783503 874.389