Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02267 ATGTACAGCATAGTATCTTTGAGCTTTCGGCATAGTCCTCCACAGTGTGACACAGCTGTAATCGATCTCAGTGTAACTGTAACCTATGTCACTGTCAGTCTTTGTGGTTTTGCTTTAAACAAACATCCAATAGGGAGAAAAGAAGACGCTAGGGCGAAGTTTCAGAACCCGGATTTTCGCCCCGATTTTCACGCGGACTTAACGGTGTCACCTCACGACGGACTCCACTTTTGGCAGTTCATGATCGCCGGATCCATCGCGGGCTGTGTCGAACACATGGCCATGTTTCCCGTTGACACCGTTAAGACCCGTATGCAGGCCTTGGGCTTGTGCCCCGTCAAAACCGGTACGGTCCGTCAGGCCCTAAAGTCCATTCTTCAATGGGAGGGGCCGTCGGCCCTTTACCGTGGCATTGGCGCGATGGGCCTCGGCGCCGGCCCGGTCCACGCTGTCTATTTCTCCGTATACGAGACCTGCAAGAAGCGTTTCTCTGTTGGGAAGCCTAAGAACGCCGCCGCGCACGCCGCCTCCGGTGTCTGCGCCACCGTGGCCAGCGACGCCGTGTTCACACCGATGGACATGGTGAAACAGCGGCTGCAGCTGGGGAACAGCGGGTACAAAGGGGTTTGGCACTGCGCCGCGAAACGTGGTCTAATGGAGGTCTCTCCGGATAGTGTTGACGATGAACGGTTGGTTGTGCATGCCACCGCCGGTGCTGCTGCCGGAGCCTTGGCTGCCGCAGGTACGACGCCTTTTGATGTTGTCAAGAATCAGTTGCAGTGTCAGGGTGTCTGTGGTTGTGATAGGTTCAAAAGTGGATCAATTGGGGATGTTGTTAGAACAATATTGAACAAAGATGGATATAGAGGGCTCATGCGAGGATGGATTCCAAGGATGCTCTTTCATGCTCCTGGAGCTGCTATTTGCTGGTCTACATATGAAGCTGGAAAGTCCTTTTTCCAAGATTTCAATCAGCAGAAAGACCTGGAACTGTTACCAAATTGCATCCAAATTGCATTTGAACTGCGCATGCCACATAAGCTTTTTGAGTTATTTGCCGAACTTTGCAGGAAGAGAGAGGCTGAAGATCACATTGACAGAGCACTTAAGGCCTTGGGTGATGAAGAGCTTCACATATTATTTAACTATGCTCGAAAATGGAATACAAAACCAAGACTCTGTTATATTCACAGTTTGTACTTTTCAGAGTTTTCAGCATCTTTCCTCCAACAGATATTGTTCAGATTAAAGGAATTGGTGAACTTCTTGAAGGCATTATCCCATATAGTCAGAGGCATTATCTCAGAATATGATATACCATCGAAATCAGGCAATATGCATTACATAATCCGTACTACGCTCGAAACGTGGGTAATGTGCGTAGTCCGCAATAAGTGTGCAATCCGCACTATGGCAATCCATACTACACTCGAAGTGACTAATACATTGCGCAATTCGTACTACGTGTATAATCCGTAG 1479 0.4888 MYSIVSLSFRHSPPQCDTAVIDLSVTVTYVTVSLCGFALNKHPIGRKEDARAKFQNPDFRPDFHADLTVSPHDGLHFWQFMIAGSIAGCVEHMAMFPVDTVKTRMQALGLCPVKTGTVRQALKSILQWEGPSALYRGIGAMGLGAGPVHAVYFSVYETCKKRFSVGKPKNAAAHAASGVCATVASDAVFTPMDMVKQRLQLGNSGYKGVWHCAAKRGLMEVSPDSVDDERLVVHATAGAAAGALAAAGTTPFDVVKNQLQCQGVCGCDRFKSGSIGDVVRTILNKDGYRGLMRGWIPRMLFHAPGAAICWSTYEAGKSFFQDFNQQKDLELLPNCIQIAFELRMPHKLFELFAELCRKREAEDHIDRALKALGDEELHILFNYARKWNTKPRLCYIHSLYFSEFSASFLQQILFRLKELVNFLKALSHIVRGIISEYDIPSKSGNMHYIIRTTLETWVMCVVRNKCAIRTMAIHTTLEVTNTLRNSYYVYNP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02267 492 ProSiteProfiles Solute carrier (Solcar) repeat profile. 229 319 IPR018108 -
Spst2g02267 492 FunFam Mitochondrial RNA-splicing protein MRS3 56 203 - -
Spst2g02267 492 Pfam Mitochondrial carrier protein 75 163 IPR018108 -
Spst2g02267 492 Pfam Mitochondrial carrier protein 169 213 IPR018108 -
Spst2g02267 492 Pfam Mitochondrial carrier protein 230 322 IPR018108 -
Spst2g02267 492 Gene3D Mitochondrial carrier domain 218 342 IPR023395 -
Spst2g02267 492 Gene3D Mitochondrial carrier domain 47 217 IPR023395 -
Spst2g02267 492 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 162 IPR018108 -
Spst2g02267 492 PANTHER MITOFERRIN-1-RELATED 75 215 - -
Spst2g02267 492 SUPERFAMILY Mitochondrial carrier 73 314 IPR023395 -
Spst2g02267 492 Pfam Utp13 specific WD40 associated domain 325 426 IPR013934 GO:0006364|GO:0032040
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02267 Spst-Chr2 21851088 21854286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02267 53 324 Chloroplast and Mitochondria Gene Families AT1G07030 63.694 1.69e-126 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02267 K15113 - gmx:100802640 501.901