Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02266 ATGGGACTTTATAGCAAGGGTATCAGGTTTGAAGGTGGAGGGAGACAGTCCATAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACCTCCACCCTGATCTCAAACGAGGGAAGCTGACACCCCAAGAAGAACACCTCGTGATGGAGCTGCATTCCAAATGGGGAAATAGATGGTCAAGAATTGCTGGGAAGCTACCAGGGCGCACTGACAATGAGATTAAGAATTATTGGAGGACTCACATGAGGAAAAAGAAGGCTCTAGAGAAAAAACGTGCATCATCATCTTCATCATCATCATCACCTGTGTCTTCTAGATCTCTAGCTTCACTATCCTCAAACAACCATGCTGTGGATTCACATGCTTCCAAAGAGGTGGGAGACGAGAGCTTTTATGACACAGGTGGAAATGATGACATGATGGGGTTGATCGGAGTTGGAAAAGAGGAAGGTGGTGAAAAGGGGTACTCTATGGATGACATATGGAAAGATATTGTTGTGTCAGAAGAGAACAACATGTATAATATTCTGCAACCTGTGTATGAAGGGCACAGTGAAGAGGGATGCAACTTCTCTTGTCCATCATCATGGGAGTACAATTGTTTTCACCCTCTATGGGTGATGGATGAAGAAGAAAGTAACAAGATGTTGTTCTCTGCATTCAGTGATCAATACTATTCCTGCTACGAACAAGGCAATGCATTTCTAACCGGCTAA 729 0.4362 MGLYSKGIRFEGGGRQSIGLNRTGKSCRLRWVNYLHPDLKRGKLTPQEEHLVMELHSKWGNRWSRIAGKLPGRTDNEIKNYWRTHMRKKKALEKKRASSSSSSSSPVSSRSLASLSSNNHAVDSHASKEVGDESFYDTGGNDDMMGLIGVGKEEGGEKGYSMDDIWKDIVVSEENNMYNILQPVYEGHSEEGCNFSCPSSWEYNCFHPLWVMDEEESNKMLFSAFSDQYYSCYEQGNAFLTG 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02266 242 SMART sant 40 88 IPR001005 -
Spst2g02266 242 FunFam MYB transcription factor 43 110 - -
Spst2g02266 242 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Spst2g02266 242 MobiDBLite consensus disorder prediction 88 138 - -
Spst2g02266 242 SUPERFAMILY Homeodomain-like 21 92 IPR009057 -
Spst2g02266 242 Gene3D - 10 40 - -
Spst2g02266 242 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 117 IPR044676 GO:0003700|GO:0006355|GO:0043565
Spst2g02266 242 CDD SANT 45 86 IPR001005 -
Spst2g02266 242 Gene3D - 44 87 - -
Spst2g02266 242 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
Spst2g02266 242 Pfam Myb-like DNA-binding domain 41 85 IPR001005 -
Spst2g02266 242 MobiDBLite consensus disorder prediction 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02266 Spst-Chr2 21850028 21851007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02266 1 238 MYB Transcription Factor Family AT3G46130 52.675 2.71e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst2g02266 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02266 K09422 - gmx:100776886 334.724