Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02263 ATGTTGCTAGCCAAAGGTGGTGAAGACCCATCTAGAGAGAGGGTTGTAAAGAGTGGTGAGTATAAGTGCAAGACTTGTAATAAGCAATTCCTTTCGTTTCAAGCCCTTGGCGGCCACCGAGCTAGCCACAAGAAGCTGAAACGTATGACTCCAAACCTTTCGTGTTCGACCGTGACACCGAAGTTGCACCAATGCTCAATCTGTGGGCTCGTGTTTGATATTGGACAAGCGTTGGGAGGGCACATGAGAAAGCATAGAGTTTCTTCAAATGATACCTTGCAAATTCATGACCAAGATGTGCCACAATCTAATGGCACCAAAAGGCTTCGCTTGTGGTTCGACTTGAACTTGACACCGTACGAGAATGATCTGAAACAAAATTTAATAACACCCGATTTACATTTGTTCATTTGA 414 0.442 MLLAKGGEDPSRERVVKSGEYKCKTCNKQFLSFQALGGHRASHKKLKRMTPNLSCSTVTPKLHQCSICGLVFDIGQALGGHMRKHRVSSNDTLQIHDQDVPQSNGTKRLRLWFDLNLTPYENDLKQNLITPDLHLFI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02263 137 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 85 IPR013087 -
Spst2g02263 137 Gene3D Classic Zinc Finger 18 85 - -
Spst2g02263 137 Pfam C2H2-type zinc finger 21 45 - -
Spst2g02263 137 Pfam C2H2-type zinc finger 63 86 - -
Spst2g02263 137 SUPERFAMILY beta-beta-alpha zinc fingers 21 85 IPR036236 -
Spst2g02263 137 ProSitePatterns Zinc finger C2H2 type domain signature. 23 43 IPR013087 -
Spst2g02263 137 ProSiteProfiles Zinc finger C2H2 type domain profile. 21 48 IPR013087 -
Spst2g02263 137 PANTHER ZINC FINGER PROTEIN ZAT5 15 123 - -
Spst2g02263 137 SMART c2h2final6 63 85 IPR013087 -
Spst2g02263 137 SMART c2h2final6 21 43 IPR013087 -
Spst2g02263 137 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02263 Spst-Chr2 21802729 21803142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02263 18 125 C2H2 Transcription Factor Family AT2G37430 49.153 2.66e-27 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g02263 zf-C2H2_6 5e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02263 - - gmx:112998408 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00453 5 3586670 3587179 Spst2g02263 2 21802729 21803142 PCT