Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02250 ATGTTTCCGAGAGAGAATCATAGTAACGGCTATGAGCCGGTGCCTGCAATGGGTCACAGCCACAGCCACAGCCACAGTCACAGAGAGCGAGTCCGTCGCGGCACTCGCAGGTCACGTGCCCCTTCTTCCACGCACTCCCTTAGGGTTTTCGACCAATCGCAATCGCAGCAGCAACCGCAACACCATCGACCTCCCTGTACTGATTTCGACGTCGCCTATTTCCATTCCTACGCTCACCTCGGTATCCACCAAGAGATGATCAAGGATCGTGTGCGAACTGAAACTTACAGGGAAGCTATCATGCAGCATCAGAGTTTCATTGCAGGCAAAGTTGTGGTTGATGTTGGATGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAATTGATGCCAGTGACATTGCCTTACAGGCAAATGAAGTTGTGAAAGCAAATAACTTGTCTGATGTTGTTGTTGTATTGCATGGACGAGTCGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGAGTATGCTTGGAAGTGTTATTAATGCTAGAGATCGATGGCTCAAACCTGGAGGTCTTATTCTTCCATCAAGTGCAACGTTGTACATGGCTCCTGTCACGCATACGGACAGATACAGTGATAGTGTTGACTTCTGGCGCAATGTTTATGGAATTAATATGTCTGCCATGGTACCATTAGCTAAACAATGTTCATTTGAAGAACCTTCCGTGGAGACAATAACGGGTGAAAATGTTTTGACATGGCCACATGTGGTAAAGTTTATCGATAGTTATTCTGTTACCATCCATGAGTTAGAATCTGTAACAACCAAGTTTAAGTTCAATTCTATGATGCGAGCACCACTACATGGTTTCGCATTTTGGTTTGATGTTGAATTTAACGGGCATGCAATAGCATCAACCAATTATAATTCAACAACATTTATTGACAATCATCAGATGAATGGTAGTCAGAGGAAAAGGCGAACAAATCCCAACGAAACACTGGTCTTGTCCACTGCGCCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTTTATGATCCTATAGAGCTGGAACAAGATCAACTAATTGAAGGTTTAGTGACATTGTCTCAAAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATAGTTCAGGTGGTCGATCGCATGTGAAAGAGTCGGTTATGAGATGA 1263 0.4347 MFPRENHSNGYEPVPAMGHSHSHSHSHRERVRRGTRRSRAPSSTHSLRVFDQSQSQQQPQHHRPPCTDFDVAYFHSYAHLGIHQEMIKDRVRTETYREAIMQHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVINARDRWLKPGGLILPSSATLYMAPVTHTDRYSDSVDFWRNVYGINMSAMVPLAKQCSFEEPSVETITGENVLTWPHVVKFIDSYSVTIHELESVTTKFKFNSMMRAPLHGFAFWFDVEFNGHAIASTNYNSTTFIDNHQMNGSQRKRRTNPNETLVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGLVTLSQSKENARFMNIHLEYSSGGRSHVKESVMR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02250 420 MobiDBLite consensus disorder prediction 40 63 - -
Spst2g02250 420 Gene3D - 214 419 - -
Spst2g02250 420 Gene3D Vaccinia Virus protein VP39 67 212 IPR029063 -
Spst2g02250 420 MobiDBLite consensus disorder prediction 21 39 - -
Spst2g02250 420 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 44 408 IPR025799 GO:0016274|GO:0018216
Spst2g02250 420 Pfam Ribosomal protein L11 methyltransferase (PrmA) 108 183 - -
Spst2g02250 420 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 70 420 IPR025799 GO:0016274|GO:0018216
Spst2g02250 420 MobiDBLite consensus disorder prediction 1 65 - -
Spst2g02250 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 410 IPR029063 -
Spst2g02250 420 CDD AdoMet_MTases 112 211 - -
Spst2g02250 420 FunFam Protein arginine N-methyltransferase 6 66 212 - -
Spst2g02250 420 FunFam Protein arginine N-methyltransferase 6 214 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02250 Spst-Chr2 21635188 21647268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02250 73 420 C2H2 Transcription Factor Family AT3G12270 36.986 7.07e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02250 K11437 - gmx:100809174 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02250 2 21635188 21647268 Spst2g02250 2 21635188 21647268 ECH