Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02240 ATGTCTGTGACATCCAAGGTCCTGCCTGCACTCCACTCTACCAAATCGTTGCCTCCTGAGTTCAAGATTTCTTCTGGTCAAATCGAAAACCATGGAGATGCTAAATTGAGAAGCAGTGATGCGATCGGATCAAGTAGTCCAGAAAATGATCTTTTGATAGGGGAGGTTTCAGAGGAAGCTCTTAGCCATGCCGATGACGTGGGTCTTTATGATGAGGACGTAGCGTACAGCAGAAAAGGTGTTTCGTTAGAGGACAGACCGTCTATTGCTGATGAAGTCCTAGATACGGTTCCTCTGCCCTTCCCATCAATTTCAATGTCTTCCAGTGAACGCAGGTGGAGTGATACAACACCTTATTCTTCAAAAAAGAAGCTTCAGTCTTGGTGTCAACTTCCAAATGGGAATTGGGAGCTGGCGAAGATAATAACAACATCTGGAAGTGAATCCATCATTTCACTGTCAGACGGGAAAGTTTTGAAAGTGAACGATGAAAGTCTAGTGCCAGCAAATCCTGATATCCTTGATGGGGTGGATGACCTCATGCAGCTTAGTTATTTAAATGAACCGTCAACAAAAGCAGGGCCTGTTTTGGTTGCTATAAATCCCTTCAAGAAAGTTCCTCTATATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGCAATAACAGACACGGCCATCCGTGAAATGATACGGGACGAAGTTAATCAATCTATAATTATAAGTGGAGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAAATTTTGAAGACTAATCCAATATTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCCAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATCTCTGGTGCTAATATTCAAACATGTAGTTTTGCTGGAAAAGGGAAGCTAAACCTACAAAATGCAGAAGACTATAAATATCTTAGGCAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTCCGCACAGTCATGGAAGCTCTTGATGTTGTCCACATTGGTAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTGGGAAACATATCATTTACTGTGATTGATAATGAAAATCATGTTCAACCCGTTGAAAATGAGGGTCTGTCCCATGTAGCGAAATTAATTGGCTGTGACATTGAAGATCTCAAGTTGACTCTATCAACTCGCAAGATGAGAGTTGGTAATGATAATATTGTCCAAAAGTTGACACTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGTCTGTTTGATTGGTTGGTCGAACAGATCAATAAATCACTTGCTGTTGGAAAAAGACGCACCGGAAGATCAATCAGTATTCTAGATATCTACGGCTTTGAATCTTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCTAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATTCAAGACGGCATTGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGTCTTAATCTTTTTGAGAAGAGGCCCCTGGGGTTGTTATCTCTGTTAGATGAAGAATCCACTTTCCCAAATGGCACAGATTTAACATTTGCTAACAAGCTTAAACAGCATTTGAATTCTAATTCATGTTTCAAAGGGGAAAGAGACCAAGCCTTTACTGTACACCATTATGCTGGGCAGGTAACCTATGATACAACTGGATTTCTGGAGAAGAACAGAGACCTATTGCACTTGGATTCCATCCAACTTCTATCCTCATGCACGTGTCCTCTTCCACAAATATTTGCATCACATATGCTCACTCAATCTGATAAACCGGTAGTTGGTCCCTTGCACAAGTCAGGTGGTGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCTACTGATGCAACGACTAGAAAGCACTACTCCACATTTTATTCGCTGCATTAAACCCAATAATCTCCAATCACCTGAATCATATGAGCAAGGGCTCGTATTGCAACAGCTGAGATGCTGTGGGGTCCTGGAAGTAGTTCGAATATCAAGATCAGGTTTTCCAACAAGAATGTCTCACCATAAGTTTGCCAGAAGATATGGTTTTCTCCTCCTTGATAATGTTGCATCTCAGGATCCACTTAGTGTTTCCGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACGAAATTATTTTTCCGAACAGGGCAGATCGGTGCGCTTGAAGATACTAGAAATCGTACCCTCCATGGCATTTTACGTGTACAAAGTTGTTTTAGGGGTCACCAAGCTCGTCGTTCTCTCAAAAAGCTTCAGGGAGGAATCACTACTTTGCAGTCATTTATTAGGGGAGAAAAAACCAGAAAGGCATATTCAGCTTCACTAAAGAGGCATAGAGCTGCTGTTATTATACAGAAGCGCGTGAAAGCAGTATTTGCAAGAAACAGAATAAAGACTATTAGTGATGCGGCAGTAGTCCTACAAGCAGTTATTCGGGGTTGGTTGGTCAGAAGATGCTCAGGAAATATTGGATTTTTGAAGTCTGGAGACATGAAGATGCAAGAGTCAGATGAGGTTCTGGTTAAGTCAACTTTCCTGGCCGAATTACAGCGCCGAGTACTTAAGGCTGAAGCTTCCTTGAGAGAGAAAGAAGAGGAAAATGACATAGTTCGTCAACGTCTCCAACAATATGAGAGCAGATGGTCTGAATATGAATTAAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAAAGCCTTGCTGTTGATGACTCTGAAAGAAATTCAGATGCATCTGTTAATGTAAGTGATGAGAGAGATTACAGTTGGGATGTAGGAGGTAATCACAGACGCCAAGAGAGCAATGGGGCAAGATCAACTAGTGCTGGTTTAAGTGTAATTAGCCGGCTAGCGGAAGAATTCGAGCATCGTAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAGGTAGAAGCAAGTTTGAACCCAGATCAAGAGCTTAGGAGGTTAAAACAAATGTTTGAAGCTTGGAAAAAGGATTATGGGGCAAGACTGCGTGAAACAAAAGTCATTTTAAATAAACTTGGAAATGAAGATGGCGCACTTGAGAGAATGAAGAAAAAGTGGTGGGGAAGAAGGAACAGTACACGGATAAATTGA 3393 0.4076 MSVTSKVLPALHSTKSLPPEFKISSGQIENHGDAKLRSSDAIGSSSPENDLLIGEVSEEALSHADDVGLYDEDVAYSRKGVSLEDRPSIADEVLDTVPLPFPSISMSSSERRWSDTTPYSSKKKLQSWCQLPNGNWELAKIITTSGSESIISLSDGKVLKVNDESLVPANPDILDGVDDLMQLSYLNEPSTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCSFAGKGKLNLQNAEDYKYLRQSNCYSITGVNDAEEFRTVMEALDVVHIGKEDQENVFAMLAAVLWLGNISFTVIDNENHVQPVENEGLSHVAKLIGCDIEDLKLTLSTRKMRVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDQAFTVHHYAGQVTYDTTGFLEKNRDLLHLDSIQLLSSCTCPLPQIFASHMLTQSDKPVVGPLHKSGGADSQKLSVATKFKGQLFLLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHHKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGALEDTRNRTLHGILRVQSCFRGHQARRSLKKLQGGITTLQSFIRGEKTRKAYSASLKRHRAAVIIQKRVKAVFARNRIKTISDAAVVLQAVIRGWLVRRCSGNIGFLKSGDMKMQESDEVLVKSTFLAELQRRVLKAEASLREKEEENDIVRQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAVDDSERNSDASVNVSDERDYSWDVGGNHRRQESNGARSTSAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILNKLGNEDGALERMKKKWWGRRNSTRIN 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02240 1130 Gene3D - 739 806 - -
Spst2g02240 1130 SMART MYSc_2a 169 806 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 PANTHER MYOSIN 168 1123 - -
Spst2g02240 1130 ProSiteProfiles Myosin motor domain profile. 191 805 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 ProSiteProfiles IQ motif profile. 830 859 IPR000048 GO:0005515
Spst2g02240 1130 PRINTS Myosin heavy chain signature 244 269 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 PRINTS Myosin heavy chain signature 286 313 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 PRINTS Myosin heavy chain signature 190 209 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 PRINTS Myosin heavy chain signature 544 572 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 PRINTS Myosin heavy chain signature 491 519 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 SMART iq_5 878 900 IPR000048 GO:0005515
Spst2g02240 1130 SMART iq_5 806 828 IPR000048 GO:0005515
Spst2g02240 1130 SMART iq_5 855 877 IPR000048 GO:0005515
Spst2g02240 1130 SMART iq_5 829 851 IPR000048 GO:0005515
Spst2g02240 1130 FunFam Unconventional myosin-XIX 503 695 - -
Spst2g02240 1130 Gene3D - 507 646 - -
Spst2g02240 1130 Gene3D Myosin VI head, motor domain, U50 subdomain 380 506 - -
Spst2g02240 1130 Pfam IQ calmodulin-binding motif 811 828 IPR000048 GO:0005515
Spst2g02240 1130 Pfam IQ calmodulin-binding motif 881 897 IPR000048 GO:0005515
Spst2g02240 1130 Pfam IQ calmodulin-binding motif 834 850 IPR000048 GO:0005515
Spst2g02240 1130 Coils Coil 925 973 - -
Spst2g02240 1130 Gene3D Kinesin motor domain 665 738 IPR036961 -
Spst2g02240 1130 MobiDBLite consensus disorder prediction 1020 1034 - -
Spst2g02240 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 850 IPR027417 -
Spst2g02240 1130 ProSiteProfiles IQ motif profile. 879 908 IPR000048 GO:0005515
Spst2g02240 1130 CDD MYSc_Myo8 191 793 IPR036022 -
Spst2g02240 1130 Pfam Myosin head (motor domain) 332 793 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 Pfam Myosin head (motor domain) 191 326 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 122 171 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst2g02240 1130 Gene3D - 809 856 - -
Spst2g02240 1130 Gene3D - 857 900 - -
Spst2g02240 1130 ProSiteProfiles IQ motif profile. 809 836 IPR000048 GO:0005515
Spst2g02240 1130 Gene3D Kinesin motor domain 170 379 IPR036961 -
Spst2g02240 1130 MobiDBLite consensus disorder prediction 1015 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02240 Spst-Chr2 21532455 21546312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02240 3 1128 Myosins gene family AT1G50360 71.368 0.0 1679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02240 - K10357 gmx:100781736 2029.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02240 2 21532455 21546312 Spst2g02240 2 21532455 21546312 ECH