Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02230 ATGAAGCTTTCCTTCTCAGTTCCTTCATCCAAACCCCAATCCAAGCCCAAACCCGTCAACACCTTCGACGACACTTCCACCGCCCAAAACGACACCGGCAGATCCAAACACCTCATCACCGAATTCGATCCTTCCAAACCTGCTCCATCTCTCGCCCCCAAAACCCTAATTCCCCCAATCCAAAACCAATGGAAACCCTTCAAGAAGATGAAGAACCTCCACCTCCCCACCACCGACCCCGAATCCGAAGCCCTCACATTCGAACTCCACGCCGCCGACGAGCAACCCGACTCCGACGTCTCCTACGGCCTCAACCTCCGCCCCGTCAAAAAAAGTGAGCAAAACAATGACACCGCGCTTCCGCCGCCGTCTTTGCGCCGCGTTCCGGTGGAGAGCACGATGCTGCAGAAGCTGAAGGACGACCTGCAGAGGCTGCCGGAGGACCAGGGGTTCGACGAATTCAAGGATGTCCCGGTCGAGGGTTTCGGCGCGGCGCTTCTCGCCGGGTACGGGTGGAAGGAAGGAATGGGGATTGGTAAGAACGCGAAGGAGGACGTAAAGGTTGTGGAGATCAAACGGAGAACTGCCAAGGAAGGATTGGGGTTTGTTGGTGATGCTCCTGCTGCTATGGTTCGGGGCAACAATGTCAAGGACAACAAGGACAAGGACAAGGAGAAGAATGAAAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGTTGGACTGAAAGGTAGTGTTGTGTCTAGGATTGGGGATGATTATATTGTTTTAGAGCTTTCTAGGAGTGGAGAGAAGGTGAAGGTGAAGGTGGGGGATGTTGCTGAGTTGGGTTCTAAGGAGGAAGAGAGGTGTTTGAGGAAATTAAAGGAGTCGAAGACTCAGCGTGAGGATAAAGGGTCGAAGAGGAAGCACGGCAGGGATGAGGTGGAGGAGAAGAGAGTGGATGCTAGTAGGAGGGAGGAGAGGCGAGGGGTGGATAGCCAGAATGGGGTTGAGGAGAAGAGAGTGGATGCTGGTAGTAGAGAGGAGAGCAGAGTGGTGGATCATAGGAGGGTTTCTTGGCTTACAAGTCACATTCGGGTGAGGGTGATTAGTCGGGATTTGAAAGGAGGGAGGTTGTATTTGAAGAAGGGGGAGGTTCTGGATGTTGTTGGGCCTACCACTTGTGATGTATCTATGGATGAGAGCAGGGAGATTGTTCAAGGGGTGTCCCAAGATTTTTTGGAGACGGCAATTCCAAAACGTGGGGGACCTGTGCTTGTGTTGGCAGGTAAATACAAGGGTGTTTTTGGGAGTCTGGTGGAGAGGGATTTGGACCGGGAAACTGCGATTGTTAGGGATGCTGATACCCATGAGCTGCTCAATGTGAAGCTTGAACAAATTGCTGAATATATAGGGGACCCAAGCTTATTGGGACATTGA 1425 0.5221 MKLSFSVPSSKPQSKPKPVNTFDDTSTAQNDTGRSKHLITEFDPSKPAPSLAPKTLIPPIQNQWKPFKKMKNLHLPTTDPESEALTFELHAADEQPDSDVSYGLNLRPVKKSEQNNDTALPPPSLRRVPVESTMLQKLKDDLQRLPEDQGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVVEIKRRTAKEGLGFVGDAPAAMVRGNNVKDNKDKDKEKNEKEKVVRIVGGRDVGLKGSVVSRIGDDYIVLELSRSGEKVKVKVGDVAELGSKEEERCLRKLKESKTQREDKGSKRKHGRDEVEEKRVDASRREERRGVDSQNGVEEKRVDAGSREESRVVDHRRVSWLTSHIRVRVISRDLKGGRLYLKKGEVLDVVGPTTCDVSMDESREIVQGVSQDFLETAIPKRGGPVLVLAGKYKGVFGSLVERDLDRETAIVRDADTHELLNVKLEQIAEYIGDPSLLGH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02230 474 Gene3D - 359 413 - -
Spst2g02230 474 SMART kow_9 413 440 IPR005824 -
Spst2g02230 474 SMART kow_9 226 253 IPR005824 -
Spst2g02230 474 Pfam G-patch domain 146 202 IPR026822 -
Spst2g02230 474 PANTHER G PATCH AND KOW-CONTAINING 1 470 IPR045166 GO:0000398
Spst2g02230 474 SMART G-patch_5 157 203 IPR000467 GO:0003676
Spst2g02230 474 MobiDBLite consensus disorder prediction 1 60 - -
Spst2g02230 474 MobiDBLite consensus disorder prediction 288 343 - -
Spst2g02230 474 ProSiteProfiles G-patch domain profile. 159 205 IPR000467 GO:0003676
Spst2g02230 474 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02230 Spst-Chr2 21414823 21416247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02230 350 447 C2H2 Transcription Factor Family AT1G55460 31.633 3.22e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02230 K13101 - gmx:100784983 686.026