Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02217 ATGGCGAAGTATAAAGGTGCGGCTTTTGGTGAGCAGAGCCCACACCCTTATGCAGTTGCAAGTTCTGCATATAGCAAGATGATAAACGAAGAAAGAAGCCAATCTATTTTGGTTAGTGGAGAAAGTGGAGCTGGGAAAACGGAAAGTACAAAGATGCTTATGCGCTATCTTGCCTTTTTGGGAGGGAGAGCAGCAACTGAAGGACGCTCTGTGGAGCAACAAGTTCTCGAGTCCAATCCAGTTTTAGAAGCATTTGGCAATGCAAAGACTGTTAGGAATAATAATTCTAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACATATTTGCTGGAACGATCCCGTGTCTGTCAAATTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGCGCTGCACCAAAGGAGGATGTTGCTAAGTACAAATTGGGAGATCCAAGGAAATTCCATTACCTTAATCAATCAAATTGCTTTGAGCTTGATGGGGTGGATGATTCTAAGGAGTACCATGCAACTAAGAGAGCTATGGAGGTCGTTGGGATCAGCTCCGAGGAGCAGGATGCTATATTTCGAATAGTAGCTGCAATACTTCATTTAGGAAACATTGAGTTTGTTAAGAGAGTGGGAGAGGAGTTAGATTCCTCTCAGCCCAAGGATGAAGAATGCTATTTCCACCTAAAAACAGCGGCTGAGCTTTTGATGTGTGATGAGAAGTCCCTTGAAGACTCTTTCTGCAAACGTGTTATGGTGACTCGTGGTGAAACCATAACAAAATCGCTTGATCCAAATGCTGCAGCTCTTAGCAGAGATGCATTGGCTAAAATAGTTTATTCAAGGCTATTTGACTGGATTATTTGCAAGATAAACAACAGTATTGGGCAAGATCCAGTGTCAAAGAGCTTGATTGGAGTTCTAGATATATATGGATTTGAGAGTTTCAAGACCAACAGTAAAAGTACCCTCCAAACAATTGAGAATTCACAAAAGTATGGGATGATGACTTTGGTAGACGAAATTAGGACACGATGGAAAGTGATAGACATGCAAGAAATAAGTGACTAA 1104 0.4103 MAKYKGAAFGEQSPHPYAVASSAYSKMINEERSQSILVSGESGAGKTESTKMLMRYLAFLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQISDPERNYHCFYMLCAAPKEDVAKYKLGDPRKFHYLNQSNCFELDGVDDSKEYHATKRAMEVVGISSEEQDAIFRIVAAILHLGNIEFVKRVGEELDSSQPKDEECYFHLKTAAELLMCDEKSLEDSFCKRVMVTRGETITKSLDPNAAALSRDALAKIVYSRLFDWIICKINNSIGQDPVSKSLIGVLDIYGFESFKTNSKSTLQTIENSQKYGMMTLVDEIRTRWKVIDMQEISD 367
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02217 367 Gene3D - 136 191 - -
Spst2g02217 367 PANTHER MYOSIN 1 331 - -
Spst2g02217 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 356 IPR027417 -
Spst2g02217 367 PRINTS Myosin heavy chain signature 33 58 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02217 367 PRINTS Myosin heavy chain signature 315 343 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02217 367 PRINTS Myosin heavy chain signature 80 107 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02217 367 ProSiteProfiles Myosin motor domain profile. 1 367 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02217 367 Pfam Myosin head (motor domain) 2 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02217 367 FunFam Myosin heavy chain 136 191 - -
Spst2g02217 367 SMART MYSc_2a 1 365 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02217 367 Gene3D Myosin VI head, motor domain, U50 subdomain 192 305 - -
Spst2g02217 367 Gene3D Kinesin motor domain 1 326 IPR036961 -
Spst2g02217 367 FunFam Myosin 2 196 319 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst2g02217 Spst-Chr2 21356252 21359276 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02217 1 331 Myosins gene family AT1G04600 80.665 0.0 571
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02217 K10357 - gmx:100788123 602.438