Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02215 ATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATATCAAACCTTTAAAGACAACAAACGCTTCAGCAAGCCAAAGTTGTCTCGTACTGACTTCACCATTAACCACTATGCCGGTGATGTAAGTGAAGTACATTTTGGTCTACATAGTTATTCACCATTAACAACAAAGAAAAAAAACAGCTCAACATATGATGATTTTCAATTACAGGTCACTTATCAAACTGATTTTTTCCTTGATAAAAACAAAGACTATGTTGTTCCGGAGCATGCTGCTCTACTCAGTGCTTCCAAGTGCCCCTTTGTTTCAGGGTTGTTCCCACCTTTACCTGAGGAAACTACAAAATCAACAAAGTTCTCTTCTATAGCCACTCAGTTTAAGCTACAACTGCAATCTTTGCTTGAAACACTAAATGCTACTGAGCCACACTACATTCGTTGTGTAAAGCCAAATAACCTTCTGAAGCCAGGGATATTCGAGAACAATAATGTGTTGCAGCAGCTTCGATGTGGTGGAGTGATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGAAAGACCTTTGATGAATTTGTTCAGCGGTTTACCATCCTGGAACCTCTGGTTCTGAAAGCATGCCCTGATGAGATGACTGCTTGCAAGAGGCTTCTAGATAGAGCGAACCTTAAAGACTATCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCTGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCCTGGGACTATCAGCAAGTGTTATTCAGAGAAAAGCCCGCATGTTTCTCTGTCGCAAACAGTACATTTTATTGCAGTTTTCTGCCGTAGAACTTCAAAGGGTTGCTAAAGGACAACTTGCACGACATCAGTATGAATGCATGAGGAGGGAAGCAGCTTCTTTGAAAATTCAGAAAGATTTCCGCATGTATATTTCCAGAAATGCTTACAAAAGTATTTATGCCACAGCTATTTATATTCAAACTGGTATGCGAGGGATGGCTGCTAGAAATGAACTTAGATTCAGGAGAAGGACAAAAGCTTCAATTATTATTCAGGCTGCCAGGGAAGCCAAGGCACTTGAAGAGGCAAAAAATAATCTGGAAAAGCAAGTCAAAGAATTAATTTCATGTCTAGAAGAGGAAAAGGCAATGAGGGGTCAGGTTAATTCACTGGAAAGAAAAATTGATGAAACAGAGATGAAATATGAAGAATGTAACAGGCTTAGTGAGGAGCGCATGAATCAAATTATAGAGACAGAATCAAAGATGATTGAGATAAAGACAAATATGCAGAGGCTTGAAGAAAAAGTATCTGATATGGAAACTGAGAATCAAGTTTTGCGGCAGCAAACCTTGTTGAGTTCATCATCCAAAAGAATGTCAGGAAAGTTTTCACCTGCCACAACTACGGTAAATACAAGATCATTTCTTATTAAAGTGAGGCAATTGGCACAGCAGACTTCTAATCCAGCAAAAACATTTGGTTCAGAAGATAGTAAAGTAAGGAGATCTCTTATGGAGAGACATCAAGAGAGTGTAGAAATTCTTTTCAAATGTGTGACAAAAGATCTTGGATTCTCTGAAGGAAAACCTGTTGCAGCATTTACCCTTTACAATTGTCTGCTACATTGGAAATCTTTTGAAGCAGAAAAAACAAGCATATTTGATCGTCTTATTCAGATTATTGGTTCTGAAATAGAGGATCCAGACAAAAATGATTGTATGGCTTATTGGTTATCCAACACATCTTCTTTGTTTTTCCATCTTCATCGATGCCTAAGAGTACCTGCAGCACGGAAACCACCAACTCCAACATCATTTTTTGGGAGGATGGCTCAGGGTTTCCGCTCATCTAATAGTCTTTCGAGCAGTGCTTTTGATGTAGTGCATCAGGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAACAGCTTGCAGCTTATGTGGAAAAGATATATGGAATCGTTAGAGAAAATTTTAAGACAGACTTGTCACCTCTGCTTTCTTCTTGCATTCAGGCAGATAGAGCATCAAATGACAACAGCGAACAAGCTGGTTCTTGGCTCAGCATTAAGGAATGCCTTGATAAATATCTCAAGATTATGAAAGAAAACTATGTACCTACTGTTCTAGTTCAGAAGCTATTTAATCAAATTTTTCAATACATCAATGTGGAAATCTTTAATAGCCTTCTTTTGCATGGAGAATGCTGCACAACGAAACATGGGGAATATATAAAATCAGGGTTGGCTGAACTAGAAGAATGGTGTAATGAAGCAACGGAAGAGTACATTGGCTCGTCTTTGGATGAACTCAAACATGCAATACAAGCAGTTAGATTCTTGGTTGCACCACAAAAGGATGAGCTATCCTATGATGATCTTACAAATGACATATGCCCTGTCCTGAGTGCTCAACAGCTTTATAGAATATGTACACTTTACTCTGATGATGATGATGAAAAAAAACAAAGTGTATCAACAGATGTCACTACTAGATTAAAGCTTCTAATGACTGATGATGATGATGAAGATAACAAATCTTTCTTGATGGAGGACAACACAAGTCATCCTATTATAGTTGAAGAGATCCCTACTTCTTCTCAAGATAAGAACATTCCAAAAATTCTCTCTCTTTCTCTCGCCGCCATTGTCAATGCCGGCGGCCTCTCCGTGTCCGACGCTGCTTTAGCCGGAGATTCCGAGCCGGAGATACCCGCGGCAGTTCTGTTGGATTTTTCTAGGGTTTTCTGA 2772 0.3929 MFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTINHYAGDVSEVHFGLHSYSPLTTKKKNSSTYDDFQLQVTYQTDFFLDKNKDYVVPEHAALLSASKCPFVSGLFPPLPEETTKSTKFSSIATQFKLQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVQRFTILEPLVLKACPDEMTACKRLLDRANLKDYQIGKTKVFLRAGQMAELDACRAEVLGLSASVIQRKARMFLCRKQYILLQFSAVELQRVAKGQLARHQYECMRREAASLKIQKDFRMYISRNAYKSIYATAIYIQTGMRGMAARNELRFRRRTKASIIIQAAREAKALEEAKNNLEKQVKELISCLEEEKAMRGQVNSLERKIDETEMKYEECNRLSEERMNQIIETESKMIEIKTNMQRLEEKVSDMETENQVLRQQTLLSSSSKRMSGKFSPATTTVNTRSFLIKVRQLAQQTSNPAKTFGSEDSKVRRSLMERHQESVEILFKCVTKDLGFSEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQIIGSEIEDPDKNDCMAYWLSNTSSLFFHLHRCLRVPAARKPPTPTSFFGRMAQGFRSSNSLSSSAFDVVHQVDAKYPALLFKQQLAAYVEKIYGIVRENFKTDLSPLLSSCIQADRASNDNSEQAGSWLSIKECLDKYLKIMKENYVPTVLVQKLFNQIFQYINVEIFNSLLLHGECCTTKHGEYIKSGLAELEEWCNEATEEYIGSSLDELKHAIQAVRFLVAPQKDELSYDDLTNDICPVLSAQQLYRICTLYSDDDDEKKQSVSTDVTTRLKLLMTDDDDEDNKSFLMEDNTSHPIIVEEIPTSSQDKNIPKILSLSLAAIVNAGGLSVSDAALAGDSEPEIPAAVLLDFSRVF 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02215 923 ProSiteProfiles Myosin motor domain profile. 1 251 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02215 923 ProSiteProfiles IQ motif profile. 302 328 IPR000048 GO:0005515
Spst2g02215 923 Pfam IQ calmodulin-binding motif 304 323 IPR000048 GO:0005515
Spst2g02215 923 Pfam IQ calmodulin-binding motif 257 274 IPR000048 GO:0005515
Spst2g02215 923 FunFam unconventional myosin-Va 304 352 - -
Spst2g02215 923 SMART iq_5 253 275 IPR000048 GO:0005515
Spst2g02215 923 SMART iq_5 324 346 IPR000048 GO:0005515
Spst2g02215 923 SMART iq_5 301 323 IPR000048 GO:0005515
Spst2g02215 923 SMART iq_5 276 298 IPR000048 GO:0005515
Spst2g02215 923 Coils Coil 422 456 - -
Spst2g02215 923 ProSiteProfiles IQ motif profile. 277 306 IPR000048 GO:0005515
Spst2g02215 923 Pfam DIL domain 721 824 IPR002710 -
Spst2g02215 923 ProSiteProfiles Dilute domain profile. 562 846 IPR002710 -
Spst2g02215 923 Coils Coil 356 414 - -
Spst2g02215 923 CDD MyosinXI_CBD 513 868 IPR037975 GO:0007015
Spst2g02215 923 Gene3D Kinesin motor domain 143 185 IPR036961 -
Spst2g02215 923 ProSiteProfiles IQ motif profile. 327 354 IPR000048 GO:0005515
Spst2g02215 923 Gene3D - 54 142 - -
Spst2g02215 923 PANTHER MYOSIN 1 834 - -
Spst2g02215 923 Gene3D - 1 43 - -
Spst2g02215 923 Gene3D - 186 249 - -
Spst2g02215 923 SMART DIL_2 720 827 IPR002710 -
Spst2g02215 923 Pfam Myosin head (motor domain) 59 239 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02215 923 Gene3D - 305 356 - -
Spst2g02215 923 Gene3D - 256 304 - -
Spst2g02215 923 SMART MYSc_2a 1 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst2g02215 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02215 Spst-Chr2 21332603 21346325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02215 1 882 Myosins gene family AT5G43900 46.817 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02215 K10357 - mnt:21394610 924.08