Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02210 ATGGACACAAAAACAACATTATTCACTTTCACAATCCTCTTTCTCTTCACCATCACCTTTCTCAAAGCCCTCACTTCACTCCTGAATCTAAACAAAACCAAACCAAAGCATCCACCAGGTCCTCGAGGTCTTCCCATAGTGGGAAACCTTCTCCAACTGGGTGCCAAGCCCCACCAAACCCTGGCCAACTTGGCCAAGATTCATGGCCCAATAATGAGCCTCAAACTCGGACAAATCACCACCATTGTGATGTCCTCAGCGGAGACAGCCAAAGGGGTGCTCCAAATCCACGACCACTTTCTCTCAAACAGGAAGATCCCTGATGCAATGAAAGGTGCCAACCATGACCAGTTTAGCTTACCCTTCATCCCAGTTTCACACAATTGGAGAGAGCTCAGGAAACTCTGCAATGGCCTCTTGTTCTCCAACAAGAACTTGGACTCCACTGAGGGACTCAGAAGCCACAAGATTCAAGAGCTTTTCAGTGACATTCACCATAGCAGCTTGAGAGGTCAACCTGTGAATATTGGAAGGTTGGCTTTCAAGACGACAATAAATTTGTTGTCAAACACAGTCTACTCAGAGGATTTGGTTCAGTCTGCTGAAAGAGCGGGGGAGTTCAAGGAGCTGGTGACCAACATCATGAAAGAGATTGGAAGGCCAAATTTGGCTGATTGTTTCCCGGTGCTCAAGGTGCTTGACCCTCACGGCATCAGAAGACGCACAGGAAGTTACTTTTCGAAGCTGTTGAACATATTCGAGGGCTTGATTCACAAAAGGTTGGAGCTGAGAAAAGATGATGCTGGTTATTGCACCAAAAATGACATGTTGGATGCCATTCTCAACAATGCTCAAGAGAATTGTCAAGAGACCGACAGGGTTAAGATTCAACATTTGTCATTGGACTTGTTTGTGGCAGGAACTGATACAGTGACATCCACAGTCGAATGGGCAATGGCTGAGTTACTTCACAACCCAAATGTTATGTCAAAGGCAAAACAAGAGCTAGAGAGGACTATTGGAAAAGGTAACCTTGTGAAGGAATCAGACATAGCTAAACTCCCTTATTTGCAAGCCATAGTGAAAGAGACTTTCAGGCTGCACCCTGCAGTTCCACTTTTACTACCTAGAAAAGCTGAAGAGGAGTTCGAGATGCATGGATACACAATTCCAAAGGGTGCACAAGTGTTAGTTAATGTGTGGGCCATAGGAAGGGACCCTAATTTGTGGGACAAGCCAGGTTTGTTTTGGCCAGAGAGGTTTTTGGGGTCAGAAATTGACTATAAAGGAAGGAGCTTTGAGCTGACCCCATTTGGTGGTGGGAGGAGAATATGCCCTGGCTTGCCATTGGCCATAAGGTTGTTGTTCTTGATGTTGGGGTTGCTCATCAATTCCTTTGATTGGGAGCTTGAGGGTGGGATTCAACCACAGGATATGAATATGGATGAAAAATTTGGACTCACCTTGGAGAAGGCTCAACCTGTCTTGGTTATTCCAATCAAACCAACTCATTAG 1515 0.4548 MDTKTTLFTFTILFLFTITFLKALTSLLNLNKTKPKHPPGPRGLPIVGNLLQLGAKPHQTLANLAKIHGPIMSLKLGQITTIVMSSAETAKGVLQIHDHFLSNRKIPDAMKGANHDQFSLPFIPVSHNWRELRKLCNGLLFSNKNLDSTEGLRSHKIQELFSDIHHSSLRGQPVNIGRLAFKTTINLLSNTVYSEDLVQSAERAGEFKELVTNIMKEIGRPNLADCFPVLKVLDPHGIRRRTGSYFSKLLNIFEGLIHKRLELRKDDAGYCTKNDMLDAILNNAQENCQETDRVKIQHLSLDLFVAGTDTVTSTVEWAMAELLHNPNVMSKAKQELERTIGKGNLVKESDIAKLPYLQAIVKETFRLHPAVPLLLPRKAEEEFEMHGYTIPKGAQVLVNVWAIGRDPNLWDKPGLFWPERFLGSEIDYKGRSFELTPFGGGRRICPGLPLAIRLLFLMLGLLINSFDWELEGGIQPQDMNMDEKFGLTLEKAQPVLVIPIKPTH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02210 504 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 CDD CYP76-like 65 499 - -
Spst2g02210 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Spst2g02210 504 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 FunFam Cytochrome P450 76C4 29 498 - -
Spst2g02210 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02210 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02210 Spst-Chr2 21290084 21292649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02210 38 501 Cytochrome P450 AT2G45550 47.761 3.47e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02210 - - lja:Lj2g3v0039250.1 667.151