Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02205 ATGAATGGTGGACCTTCCTCAAATAGCAGAGGTAGCAGTGCCAGGATTACTCTCGAAGGACTTGACATTATCGTTGTAGAGAAAGCACTGAGGTTCAAGTTTAAATCCTCAAATAATCAAGTCGAGTATGAAGCCTTAATTGTCGGTTTAAGGCTGCTCACAACAACACTTATAAAAATGGATTCTAACACCCAAGAGAGTGAAGTTCCTTTAGAAGTAGAAAAGGTGGATGATGCATACCTCTCTGCTGTGTTGCTTTGTTTTAGCAGGGTCCTCCCTGCAGTTCTAAACGCGGCTATTGACATCAATTTGTTTGATGTCATAGCCAAGGCAAAGAGTTCTTGTGATGAGTCAAGTTTTTCTGCCTCTGAAATCGCTTCTCTGCTTGCAAATCAGCACTCACAATTGGTTAATAGGCTTGAAAGAATGTTGCCATTGTTGGCCAGTTACTCTCTTCTTAATTGCTCCATTCGAACCAGTGAAGATGGTAAGAGAGAAAGGATTTATTCTCTCTCACCTGTTGGCCATTACTTTGCTTATGACGATGAAGGAATCTCTCTGGCCCCACTCTCAACTTTACTTCATCGCGGATTTCATGAGCTGTGGAGGGATGCAAAAGGTGCATTTCTGGACCCTGATTGCAATAACCATTTCGAAAGTGTCTTTGGAATGCTGTCATATCAATATATGGAGAAAAACACAGAGTTGAATCAAATGTTTTACAAGGCAATGGCTCATGCTGGTCCAATAGAAGTGAAAAGGGTACTCAAAGTATATAAAGGATTTGAGGGATTGTCAACACTGGTTGATGTAGGAGGTGGAGTAGGAGAGACCCTGAAACTGATTATCTCTGCATATCCTTCAATCAAAGGAATTAATTTTGATTTGCCTCAGATGATTCTAGATGCACCAACTCATCCAGGTGTAGAGCATGTGGGAGGAGATATGTTTGAACGTGTTCCAAATGGTGATGCCATCTTACTAAAGTCTATATGTCACAATTGGGCAGATGAAGATTGTATAAAATTTTTAAGAAATTGTCACAAAGCTTTGCCACCGCATGGAAAAGTGATTGTTTTGGACTACATAATTCCAGAGGTTCCAAATGCAAGTGATGCATCTAAACATAGTAGCATTGTGGACAATCACATGTTTTTAGCTCATGGTGGAAGGGAAAGAACTCAGAATGAATTTGAGAACTTGTGCAAGAGTTCTGGTTTTTCCAAGTTTCAAGTTGCATGCAGTGGCATCTCAGCTACTGTAGGAGTGATGGAGTTCTATAAACAGAGTTTTTGA 1296 0.4035 MNGGPSSNSRGSSARITLEGLDIIVVEKALRFKFKSSNNQVEYEALIVGLRLLTTTLIKMDSNTQESEVPLEVEKVDDAYLSAVLLCFSRVLPAVLNAAIDINLFDVIAKAKSSCDESSFSASEIASLLANQHSQLVNRLERMLPLLASYSLLNCSIRTSEDGKRERIYSLSPVGHYFAYDDEGISLAPLSTLLHRGFHELWRDAKGAFLDPDCNNHFESVFGMLSYQYMEKNTELNQMFYKAMAHAGPIEVKRVLKVYKGFEGLSTLVDVGGGVGETLKLIISAYPSIKGINFDLPQMILDAPTHPGVEHVGGDMFERVPNGDAILLKSICHNWADEDCIKFLRNCHKALPPHGKVIVLDYIIPEVPNASDASKHSSIVDNHMFLAHGGRERTQNEFENLCKSSGFSKFQVACSGISATVGVMEFYKQSF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02205 431 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 84 428 IPR016461 GO:0008168
Spst2g02205 431 SUPERFAMILY "Winged helix" DNA-binding domain 76 182 IPR036390 -
Spst2g02205 431 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 193 414 IPR029063 -
Spst2g02205 431 Pfam Dimerisation domain 95 148 IPR012967 GO:0046983
Spst2g02205 431 CDD AdoMet_MTases 267 364 - -
Spst2g02205 431 FunFam Caffeic acid 3-O-methyltransferase 62 178 - -
Spst2g02205 431 Gene3D Vaccinia Virus protein VP39 237 415 IPR029063 -
Spst2g02205 431 Pfam O-methyltransferase domain 202 408 IPR001077 GO:0008171
Spst2g02205 431 Gene3D - 91 255 IPR036388 -
Spst2g02205 431 PANTHER O-METHYLTRANSFERASE 86 416 IPR016461 GO:0008168
Spst2g02205 431 FunFam Uncharacterized protein 179 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02205 Spst-Chr2 21225099 21228375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02205 60 429 Monolignol Biosynthesis Gene Families AT5G54160 43.968 2.17e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02205 - - gmx:106794104 562.377