Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02204 ATGGCTGCTGTTCCGATACCCTCAAACATTTTACCAGCAGATGGAAGCCCTGACTGGTTGAATAGAGCAGACAATGCATGGCAGCTTGTGGCAGCAACACTGGTGGGTCTGCAGAGTGTTCCAGGGCTGATAATCTTGTATGGTGGAGCAGTGAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCACTGTATGCTTTTGCATGTGTGTTTTTCTGTTGGGTTGTGTGGGGATACAGAATGTCCTTTGGTGACGAACTTGTCCCTTTCTGGGGTAAGCCTGCCATGTCACTTGAACAGGACTATCTCTTCAAGAAGGCCTTTTTGGGGGCCATCCCTAATGCCACAATGGTGTATTTCCAGTGTGTCTTTGCAGCCATTACTCTGATTCTCATTGCTGGGGCTCTGTTGGGACGCATGAACTTCTATGCTTGGATGCTGTTTGTGCCTTTGTGGCTCACTTTCTCTTACACTTTCACAGCTTTCAGCATATGGAGTACCAGTGGCTTTTTGTCCAAAATGGGGATAATAGACTACTCAGGTGGATATGTCATCCATTTGTCTTCTGGGGTTGCTGGTTTCACAGCAGCATATTGGGTTGGACCAAGGCTGAACAAGGACAGGGAAAGGTTTCCTCCAAACAACCTGCTTCTGATGTTGGCAGGTGCAGGGCTGTTGTGGATGGGGTGGACAGGGTTCAACGGAGGAGATCCATACATAGTGAATTCAGATGCTTCCCTTGCCGTCCTCAACACCCACGCTTGTACTGCCACCAGCTTGCTCATTTGGGTTTTACTTGATGTCATCTTCTTCCGGAAGCCTTCTGTCATTGGAGCTGTTCAAGGCATGATCACTGGTTTGGTCTGCATTACCCCTGCTGCAGGAGTTGTACAGGGATGGGCAGCACTTTTAATGGGAGTGTTCTCTGGCTCAATTCCTTGGTTCACAATGATGGTGGTCCACAAGAGATCAAAGCTACTGCAGAAGGTTGATGACACAATGGCAGTGTTCCACACACACGCCATTGCAGGAACCCTAGGAGGACTCCTCACTGGACTCTTTGCCGAGCCAAGACTTAACAGATTGTTCTACGGTGTTCCTGGAAATTACGTTGGTCTGTTCTATTCTTTCCATCAAAACTTATTCAACACCGGGTTGAGGCAAATGGGGATCCAAATCCTTGGGATTCTCTTTGTGATCGTTGTCAATGTTATCAGCACAAGCTTGATTTGCCTCTTCATTAGACTTTTTGTTCCTCTCAGAATGTCTGAAGAGGACATGGAGATTGGTGATGAAGCTGCTCATGGGGAAGAGGCTTATGCCATCTGGGGTCAGGGTGATAAGCTTGAAAATTCAAGTTCTAAGTATGGGAGTTCATTGTATGATGATATTGAATCTGGGGCACCCAAGAAGAAACGTGGTGGCACAGTTGAAATGATGTAA 1443 0.4705 MAAVPIPSNILPADGSPDWLNRADNAWQLVAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDELVPFWGKPAMSLEQDYLFKKAFLGAIPNATMVYFQCVFAAITLILIAGALLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSTSGFLSKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNLLLMLAGAGLLWMGWTGFNGGDPYIVNSDASLAVLNTHACTATSLLIWVLLDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALLMGVFSGSIPWFTMMVVHKRSKLLQKVDDTMAVFHTHAIAGTLGGLLTGLFAEPRLNRLFYGVPGNYVGLFYSFHQNLFNTGLRQMGIQILGILFVIVVNVISTSLICLFIRLFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDIESGAPKKKRGGTVEMM 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02204 480 FunFam Ammonium transporter 9 443 - -
Spst2g02204 480 NCBIfam ammonium transporter 24 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst2g02204 480 Pfam Ammonium Transporter Family 26 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Spst2g02204 480 ProSitePatterns Ammonium transporters signature. 178 203 IPR018047 GO:0008519|GO:0016020|GO:0072488
Spst2g02204 480 SUPERFAMILY Ammonium transporter 19 422 - -
Spst2g02204 480 PANTHER AMMONIUM TRANSPORTER MEP2 11 452 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst2g02204 480 Gene3D Ammonium transporter AmtB like domains 12 458 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02204 Spst-Chr2 21196563 21198289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02204 115 474 Inorganic Solute Cotransporters AT2G38290 61.111 3.87e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02204 K03320 - gmx:100787856 867.07