Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02199 ATGTCAGAATCAAACGCAATTGCAAATGGATTGGCTGGTGCAGGAGGTGGAATCATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAATACGCGCCAGCAAACTGAGAGAACACTCAAGAGGACCAGGCAAAGTTTTCCCTCCAACTCAGCCACTGCTCCTGGCATTCTTTTTCAGATGTTTCAGGTCGTTAGATATGAGGGTTGGGGTGGACTCTATAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGAATTTACTACTATTTCTATCAAGTTTTCAAGAACAAGGCAGTGGCGATTGCGGCTGCACGGAAATTGAAAGGGCGTGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCAATTGCTGGGTCCTTGAATGTGTTGTTGACAAATCCGATATGGGTTTTAGTGACTCGAATGCAGACTCATACTCAAGCAGAAAGGAAAATTGTGGAGAAAAAGAAAGAAGCTTTAAGGAAGGCTGCTTCTGAAAGAACCATAGCAGACCCAACATTGCAAGATAAATTGAATGAACTGAATTCTATAAAACCTCGCCCATATGGAACAATACATGCAGCTAATGAAGTCTACAATGAAGCGGGTACAGTAGGATTTTGGAAGGGTGTGATCCCTGCCCTTATTATGGTATGCAATCCATCAATCCAGTTTATGATTTATGAAAGCTCATTAAAGCATCTAAGGGCAAAACGTGCAGCTAAGAAGCATGAGGATACAAGTATATCTGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCTAAACTTGGAGCCACTGTCGCGACATATCCATTACTAGTTGTGAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAGTAGCTCATTTAGATACTCAGGTACTTTTGATGCTCTGCTTAAAATGATCCGTTACGAAGGACTACCTGGCTTCTATAAGGGGATGAGCACAAAGATAGTGCAAAGTGTTTTTGCAGCTTCTGTTCTGTTCATGATCAAAGAGGAGCTTGTAAAGGCCATTATGGTTCTAGCAAATAAGACCAAAAGCATCAAATTTGAGTAG 1086 0.4254 MSESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRTRQSFPSNSATAPGILFQMFQVVRYEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKLKGRGDGTVGMFGWLVVAAIAGSLNVLLTNPIWVLVTRMQTHTQAERKIVEKKKEALRKAASERTIADPTLQDKLNELNSIKPRPYGTIHAANEVYNEAGTVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRAAKKHEDTSISALEVFLVGAIAKLGATVATYPLLVVKSRLQAKQEIGGSSSFRYSGTFDALLKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMIKEELVKAIMVLANKTKSIKFE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02199 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 256 347 IPR018108 -
Spst2g02199 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Spst2g02199 361 Gene3D Mitochondrial carrier domain 11 358 IPR023395 -
Spst2g02199 361 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 352 IPR044712 GO:0006862|GO:0055085
Spst2g02199 361 Pfam Mitochondrial carrier protein 256 348 IPR018108 -
Spst2g02199 361 Pfam Mitochondrial carrier protein 4 100 IPR018108 -
Spst2g02199 361 Pfam Mitochondrial carrier protein 119 243 IPR018108 -
Spst2g02199 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 241 IPR018108 -
Spst2g02199 361 SUPERFAMILY Mitochondrial carrier 5 343 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02199 Spst-Chr2 21121983 21126061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02199 57 346 Chloroplast and Mitochondria Gene Families AT1G25380 25.338 2.57e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02199 K13354 - gmx:100775304 603.979