Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02198 ATGTTTGTGTATATCGTAGTATTTGCTTCAATTATTCTCTCCTTCATCTTCTTCCAAATAAGCTGGAGATACAATAAAGATACACCTATCACAAATTGGCCAATAATTGGTATGCTACCTGGATTTCTTCAAAATTCTTCCAATATCTTTGATTATTTTACCTTGGTTTTGAAACATTATGGAGGTACTCTAGCATTTGAAGGACCCTGGTTCTCAAACACAAAGTATCTTGTCACTAGCGATCCCATGAACGTGCACCAAATCGTAAGCAAGAAATTTGGCAACTATGGAAAAGGGACCGATTTCAACGAGATTTTTTATGGTTTTGGAGGTGGGATTTTCAATTCTGATTTCCATGCATGGGAAGAAGCGAGGACAACACTTCATTCACTGTTTAAAAGGAAAAGCTTTATGATCTTCCTTCAACAAACCATTCAGAAGAAGATGGAGAATTTCCTGATACCATTTCTTGATCATGCATCCAAAGAAGGAGTTGAGTTGGACATACAAGATGCCTTGGAGAGATTCGCCTTTGACGCCATCTGCTCCATTACTCTTGGATATGATCCGAATTGTCTTCCAAACAAGCTCGCTAAGGTCTCACGCGTTGCTTATGAGAAAGATTTAACTGAGACGGCGCATGTAGTATTCCTTAGACACTTCAGACCAAGATGGTTGTGGAAGCTGCAACGATGGCTCCATATTGGTCCAGAGAAGAGGTTCAAAGAGGCCATAGACAATCTTGATAAATTATTGAATGAACGCATTACATGTAAACGTGAAGAGCAAAATAGACGAAATAGCTCCAAAAAAGTGGATGACACTCATTCTGACCTAATAGGAGTGTTAATGGAGGAAGCAGCTCTAAAAGGGCAAGTGATGGATGACAAGTATCTTAGAGACACAACATTTAGCCTTCTTTCTGCTGGAAGCGTCACAGTTAGTACGAGTCTCAGTTGGTTCTTTTGGCTCGTTTCAACTCATCCACATGTGGAAGCCAAAATTCTTCAAGAGATCAAAGATAACTGTTTGAATCAAGATGGAAACATCATTGATTCCAGTTTAGAAGAGCTTGGTAAGCTTGTTTACCTCCATGGAGCTATATGTGAAGCCCTGAGGCTTTTTCCTTCCGTTCCCTTTAATCACAAGTGTGCAATCGAATCTGATATCCTTCCTAGTGGACACCATGTTAGTCCAAATACCAAGATATTATACTCTTTGTACTCAATGGGAAGGATGGAACAAATATGGGGAAATGACGTCGTGGAGTTTAAGCCTGAGAGATGGATTTCAGAGAGAGGACGCGTCATACACGTTCCATCTTACAAGTTCATAGCTTTCAATGCAGGTCCTAGAAGTTGTTTGGGTAAAGACATTGCTTTGATTGAAATGAAGATGGTTGCAGTTGCCATATTGTGGAGGTTTCACATGCAGGTCGTGGAAGGTCATCCAATAACCCCAAGGATGTCTATTTTACTTACCATGAAACATGGCTTGAAGGTCAAACTTACTGAGAGATGCGTTTGA 1527 0.4014 MFVYIVVFASIILSFIFFQISWRYNKDTPITNWPIIGMLPGFLQNSSNIFDYFTLVLKHYGGTLAFEGPWFSNTKYLVTSDPMNVHQIVSKKFGNYGKGTDFNEIFYGFGGGIFNSDFHAWEEARTTLHSLFKRKSFMIFLQQTIQKKMENFLIPFLDHASKEGVELDIQDALERFAFDAICSITLGYDPNCLPNKLAKVSRVAYEKDLTETAHVVFLRHFRPRWLWKLQRWLHIGPEKRFKEAIDNLDKLLNERITCKREEQNRRNSSKKVDDTHSDLIGVLMEEAALKGQVMDDKYLRDTTFSLLSAGSVTVSTSLSWFFWLVSTHPHVEAKILQEIKDNCLNQDGNIIDSSLEELGKLVYLHGAICEALRLFPSVPFNHKCAIESDILPSGHHVSPNTKILYSLYSMGRMEQIWGNDVVEFKPERWISERGRVIHVPSYKFIAFNAGPRSCLGKDIALIEMKMVAVAILWRFHMQVVEGHPITPRMSILLTMKHGLKVKLTERCV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02198 508 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PANTHER CYTOCHROME P450 20 501 - -
Spst2g02198 508 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Spst2g02198 508 CDD CYP86A 66 499 - -
Spst2g02198 508 Pfam Cytochrome P450 30 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 Gene3D Cytochrome P450 21 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02198 508 SUPERFAMILY Cytochrome P450 21 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02198 Spst-Chr2 21096417 21097943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02198 3 508 Cytochrome P450 AT4G39490 42.748 3.17e-151 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02198 - - gmx:100791312 751.895