Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02185 ATGGGGAGGATCAAACCTCAAGCTCTGCTACAGCAAAGCAAAAAGAAGAAGGGGCCTTCTCGCATAAGGGCCACCACCGTTCTCTTCTGTACATTGATTCTTGTCATGCTTATGTATTTCCTGTTTTATAGACATTGGTCCAACAGGACAAGATTTCAACCACAGAGCTACATATCGGTCTCTGAGGATGAAAATACATTTGTGGAATCCAAAAAATCTGATCTACCTGGATATGCTGTTGTAATTACCTCTAAAGGTTCTATTATAGTCGAACTTTATAAGGAAAGTGCCCCTGAAGTTGTTGACGAATTCATAGATTTATGTCAAAAAGGGCACTTCAAGGGGATGCTTTTTCACCAAGTAATTAAGCACTATGTCATTCAGGCAGGTCACAACAAAGGGCCTGGAGCTACTGAAGATTGGAACTTGTTAGGAAAGAAATATGCGAGTATGAGACATGAAGCATTCATGCTTGGAACTTCAAATGGTAATTACTTCAACAAAGGTTTTGATCTTTTCATCACAACTGCACCGATACCGGATCTAAGTGAAAAGCTTATTGTGTTTGGCCGAGTCATCAAGGGAGAGGATATTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACATTACCAACCAAAAATTTCTATTGGGATACTTGATGTGGCTCTTAAACAGATGGATTTCACTTTAGGTTTGTCAATGAAACGTTTGATCTTTGATGCAGTTTTAGCAACATGTTTCAGTTGCTTATTCAAGGACTACGAAATCTTTTTTTTTTTTCCCCTTTCTGTCATATTGTTTGGTCTTACTTTGGTGTGGCAGGATGTAAGAAGTTCCGTTGCCACCTGCCAGTTTGCTGATATCACCTCTTATATTTATTTTGGCATTAAACTTCATTTGTATCCTCAAAAGAGGCACATTAAGATAAAAAAGAATTTTGGCCTGCCCATGCAGTTCATGTATAGTGTTTCAATTAATGACCATTTTAGGATCGAGTCAGAAATATTGGCTTGGTAA 1020 0.3824 MGRIKPQALLQQSKKKKGPSRIRATTVLFCTLILVMLMYFLFYRHWSNRTRFQPQSYISVSEDENTFVESKKSDLPGYAVVITSKGSIIVELYKESAPEVVDEFIDLCQKGHFKGMLFHQVIKHYVIQAGHNKGPGATEDWNLLGKKYASMRHEAFMLGTSNGNYFNKGFDLFITTAPIPDLSEKLIVFGRVIKGEDIVQEIEEVDTDEHYQPKISIGILDVALKQMDFTLGLSMKRLIFDAVLATCFSCLFKDYEIFFFFPLSVILFGLTLVWQDVRSSVATCQFADITSYIYFGIKLHLYPQKRHIKIKKNFGLPMQFMYSVSINDHFRIESEILAW 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02185 339 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 226 - -
Spst2g02185 339 Gene3D - 63 231 IPR029000 -
Spst2g02185 339 SUPERFAMILY Cyclophilin-like 75 224 IPR029000 -
Spst2g02185 339 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 86 224 IPR002130 GO:0000413|GO:0003755
Spst2g02185 339 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Spst2g02185 339 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
Spst2g02185 339 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Spst2g02185 339 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 183 IPR002130 GO:0000413|GO:0003755
Spst2g02185 339 CDD cyclophilin 83 221 - -
Spst2g02185 339 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 81 222 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02185 Spst-Chr2 20882086 20886130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02185 43 224 U-box Gene Family AT5G67530 23.810 3.68e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02185 - - gmx:100796043 417.542