Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02183 ATGTATTTATGTATGTATGCAGATCCAGATGCTGAGGTGATAGCACTCTCTCCCAAGACTCTAATGGCAACAAACAGGTTTATATGTGAAGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTTCACAGAAGAGGACACAACCTGCCATGGAAGCTAAAGCAGAAGACTAATAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGTGTTCACCATGATCCTTCAAGGGCTCTTGGAGACCTCACTGGTATCAAGAAACACTACTCTCGCAAACATGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAGTATGCTGTTCAATCAGATTGGAAAGCACACTCCAAAACCTGTGGCACCAGAGAGTATAGATGTGACTGTGGCACCCTCTTCTCAAGACGTGACAGTTTTATCACTCATAGGGCCTTTTGTGATGCTCTAGCACATGAGAGTGCAAGACACCCTTCCAACCTGAACCCTTTGGGAACTCATCATCTGTATGGCACAAACCACATGAGCCTAGGTCTTGGTGCCCAACTTCAGAACCAAACAGCCACTGCTAACAGCTTATTGAGCCTAGGAAGTGCACCAAAGTTTGAGCACTTAATCTCTCCTAATCTGCACCACTCATCTTCATTTGGAGTGCAGTCACCACCCCAGTCATCATTCTTCATGACTGACCCGAACCAAGCATTTCAAGACCTTCAGTCTCAGCAGCAAGCACCATTATTCTCAACCAAACAACTCCATGGTCTTATGCAACTCCCTGATCTTCAAGGAACCACCAATAACTCCACTTCTGCTTCACCAGTGTCTGCTTCAGCTAATAACGCCAATCTCTTCAACCTCGGCTTCTTTCCTAATACCAATACCAGCGGCAGCATAATCAATGACCAATTCAGCAACATAAGTGGAGGCAATAACCAAGGAACAACAACATTCTATAGTACTAGTAGTCCTGCAAGTAACCAAGTTGGTTCAGGCTTCTCTTCACTCTTTGGAAATTCATCTTTGCCACAAGATAACATGTCCCCTCACATGTCAGCCACTGCACTGCTTCAGAAAGCTGCTCAAATGGGTTCAACCACAACCACCAATGGTCCCTCCTCTCTACTGAGAGGAACAGAAGAATTGGGTGTAAGGTCAGGCATGGAGAATGAGCGCAGTAACCATCTACGCGGGTTGATGAACTCTCTTGTCCATGGAAACGCTTCCATATTTTGCAATGTGAAAGGGAACGAAAACAACCTTGGCCAGTTTCACAACGTGGTGGAGGAGCCTAAGAAGATGTCACAAAATCTTGGTGTGTGCTTTGGAGGGTCTGATAAGTTGACCTTGGACTTTTTGGGGGTTGGAGGAATGGTCAGAAACATGAACAGTAGTGGGTTCTCACAAAGAGAGCAACAACACTCCATGGGAACTATGAGCCCCCTGGATCCTAAATTGGAATCAGCACAAGCAAACCAACAATTTGGAACCTCAACACTCTAA 1512 0.4557 MYLCMYADPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHESARHPSNLNPLGTHHLYGTNHMSLGLGAQLQNQTATANSLLSLGSAPKFEHLISPNLHHSSSFGVQSPPQSSFFMTDPNQAFQDLQSQQQAPLFSTKQLHGLMQLPDLQGTTNNSTSASPVSASANNANLFNLGFFPNTNTSGSIINDQFSNISGGNNQGTTTFYSTSSPASNQVGSGFSSLFGNSSLPQDNMSPHMSATALLQKAAQMGSTTTTNGPSSLLRGTEELGVRSGMENERSNHLRGLMNSLVHGNASIFCNVKGNENNLGQFHNVVEEPKKMSQNLGVCFGGSDKLTLDFLGVGGMVRNMNSSGFSQREQQHSMGTMSPLDPKLESAQANQQFGTSTL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02183 503 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 49 IPR013087 -
Spst2g02183 503 FunFam protein indeterminate-domain 5, chloroplastic-like 81 160 - -
Spst2g02183 503 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 7 472 IPR031140 -
Spst2g02183 503 Gene3D Classic Zinc Finger 7 75 - -
Spst2g02183 503 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Spst2g02183 503 Pfam Zinc-finger double-stranded RNA-binding 27 49 IPR022755 -
Spst2g02183 503 SUPERFAMILY beta-beta-alpha zinc fingers 26 123 IPR036236 -
Spst2g02183 503 MobiDBLite consensus disorder prediction 466 503 - -
Spst2g02183 503 SMART c2h2final6 27 49 IPR013087 -
Spst2g02183 503 SMART c2h2final6 68 98 IPR013087 -
Spst2g02183 503 SMART c2h2final6 103 123 IPR013087 -
Spst2g02183 503 FunFam protein indeterminate-domain 12-like 6 74 - -
Spst2g02183 503 Gene3D Classic Zinc Finger 81 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02183 Spst-Chr2 20858321 20861800 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02183 22 466 C2H2 Transcription Factor Family AT2G02080 46.502 3.05e-120 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g02183 zf-C2H2_jaz 3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02183 K25870 - gmx:100806198 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02183 2 20858321 20861800 Spst2g02183 2 20858321 20861800 ECH