Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02180 ATGGGTAGTTGTGGAAGGGAAGGTGTCGTGAGACAGTATATAAGATCAAAAGTCCCTCGTTTAAGATGGACCCCTGAACTGCATCGTTGCTTTGTTTATGCCATTGAGACTCTTGGAGGTCATCACAAGGCTACTCCCAAACTTGTTCTTCAATTGATGGATGTTAAAGGGCTCTCAATTTCACATGTCAAGAGTCATCTGCAGAAGCTACATTCGGAGGAAGAGAACATAAGAGCTAGATTCGAGAGGACAAGTTTACTTTCAGGATTTCTACAATGCAGCCAAAGAGTATGTGAAGCAGTCCCAAATCCATACACTACTTTTCATGATCACCTTCAGAGGATGGCTGAGCAGAAGGGAATAAAGAAGATTTGTGCTGGTTCAATATGGCACACTCAACCCCTTTCCACAACCTTTCTTCCCATGCTACCAAACCAAGAATCAGATTTGCTCCCGGTTGCGAAATTAAATGATAAAGAGGGTCTGGATGAAGTTGGGAAGACTTGGAGGCTAGAAGCAGAGGATGAAGACAGGGGAGGCTGTGAGTTGTCGTTGTCCATCTCATTGCCACAGCCACATCCTTCTTCTCAGAAAAGTAATGCTTCTTCAGTAAGCGAGACCAGTGAGGTCTTTTCAATATTCCCTGAGTTTAGCCTCAACAACTACATGCCTTGTTCTACCTCTTCTAATCTTCCAAACACAATTAATTTGGACCTATCTTTGGCCATTTAA 732 0.4317 MGSCGREGVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLSISHVKSHLQKLHSEEENIRARFERTSLLSGFLQCSQRVCEAVPNPYTTFHDHLQRMAEQKGIKKICAGSIWHTQPLSTTFLPMLPNQESDLLPVAKLNDKEGLDEVGKTWRLEAEDEDRGGCELSLSISLPQPHPSSQKSNASSVSETSEVFSIFPEFSLNNYMPCSTSSNLPNTINLDLSLAI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02180 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Spst2g02180 243 SUPERFAMILY Homeodomain-like 17 71 IPR009057 -
Spst2g02180 243 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 8 109 IPR046955 GO:0003700
Spst2g02180 243 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 71 IPR006447 GO:0003677
Spst2g02180 243 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02180 Spst-Chr2 20815902 20819687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02180 1 68 G2-like Transcription Factor Family AT1G14600 71.233 3.48e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst2g02180 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02180 - - pvu:PHAVU_003G008400g 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02180 2 20815902 20819687 Spst2g02180 2 20815902 20819687 ECH