Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02170 ATGGATTTTCAAATTTTTGATATGTTAACTCCTATCTCCCTTTTCCTCCTCATGATGGTGGCACTGAAATTAGGGAGGAATCTCACCAAAACCAAGTCAACTCCAAACATACCTCCAGGACCATGGAAGCTACCCATCATAGGAAACATACCCCATCTTGTTACACCAACACCGCACAGAAAATTAAGAGACTTGGCCAAAATATATGGACCCTTGATGCATCTCCAACTTGGAGAGGTCTTTACCGTAGTTGTTTCCTCAGCAGAATGTGCCAAAGAGGTTATGAAAACTCACGATCTTGTCTTTGCATCAAGGCCTCTAATTCTCGCTTCAAAAATAATCGGTTATGATGCCACAAATATATCTTTTGCCCCTTATGGAAATTATTGGAGACAGCTAAGGAAGATTTGCACAGCTGAGCTTTTGACCCCAAAACGTCTCAATTCATTCAAGCCTATAAGAGAAGAAGAGCTCTCCAGTCTCATCAAAATGATTGCTTCAGAAAATGGATCAGCCTTCAATCTCTCTGAGGCACTCCTTACATCAACATATGCAATAATTTCGAGGGCAGCCTTTGGCAAGAAGTGCAAAGGGCAGGAAGAATATATATCAGTGGAAAAAGAAGTACTTAAGGCCGCAGGAGGTTTTGACATAGGAGATTTATTTCCTTCTGCTACATGGCTTCAAAATGTTACTGGTTTGAGGCCTACCCTTGAGAGGTTGCACCAAAAATGTGATCAAATACTTGAAAACATCATCAGGGAACACAAAGATGCAAAGTCAAAAGCAAAAGAAGGCCAAGCTGAACCAGAAGAGGACCTTGTAGATGTTCTCCTAAAATTTCAGGATGATCGTGATGACAACCAGGATATTTGCTTAACTGATGACAACATCAAGGCTATAATTGATAATATCTTTGCTGCTGGAGGTGAGACATCAGCAACTACGATAGATTGGACAATGGCAGAGATGATAAGGAATCCAAGGGTGATGAAGAAAGCACAAGCTGAAGTGAGAGAGACATGTGAGATTAATGGGTATCGTATACCAGTGAAAAGTAAGGTAATTGTGAATGTTTGGGCAATTGGAAGAGATCCAAAGTATTGGACTGACCCAGAGAGGTTTTATCCAGAGAGATTCATTGACAGCTCTATTGACTACAAAGGAAATAATTTTGAGTTCATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCATCACATTTGGTTTGATTAATGTTGAACTGGCACTTGCAGTTTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGGCGAGGAATTGGACATGACTGAACAATTTGCATTAACTGTTAGAAGAAAAGATGACCTAAAGGGGGCTCCCGCGACCCCATTTTCAGTCTCCCTAGCCCCATTTTTAGCCCCGCTCACCATCACCGCAGACCCCCCAACCCCCGTGTTCCTCCACTCATCTTCGGATCCACATTCTCCCTATACCTTCACACTCGACCAGCACCCAAATCTTCCATCCCCCTCACCTAATCATGGAGCCACCGTGAACCAAACCAAAATTCCCCATCCCTACTCTCAATTGACCCCTCTCGTCATCATCGACCCCCCGGTTTCGTCGTACCAACACCTCCATTGTGCCCTAAGCCACCAGTCACGCCTCCATGACATCACACCTCTCTTTCTCGGTCGCGCCACCTCCATCGCAGCCCGCACCTATCATTAA 1725 0.4371 MDFQIFDMLTPISLFLLMMVALKLGRNLTKTKSTPNIPPGPWKLPIIGNIPHLVTPTPHRKLRDLAKIYGPLMHLQLGEVFTVVVSSAECAKEVMKTHDLVFASRPLILASKIIGYDATNISFAPYGNYWRQLRKICTAELLTPKRLNSFKPIREEELSSLIKMIASENGSAFNLSEALLTSTYAIISRAAFGKKCKGQEEYISVEKEVLKAAGGFDIGDLFPSATWLQNVTGLRPTLERLHQKCDQILENIIREHKDAKSKAKEGQAEPEEDLVDVLLKFQDDRDDNQDICLTDDNIKAIIDNIFAAGGETSATTIDWTMAEMIRNPRVMKKAQAEVRETCEINGYRIPVKSKVIVNVWAIGRDPKYWTDPERFYPERFIDSSIDYKGNNFEFIPFGAGRRICPGITFGLINVELALAVLLYHFDWKLPNGMKGEELDMTEQFALTVRRKDDLKGAPATPFSVSLAPFLAPLTITADPPTPVFLHSSSDPHSPYTFTLDQHPNLPSPSPNHGATVNQTKIPHPYSQLTPLVIIDPPVSSYQHLHCALSHQSRLHDITPLFLGRATSIAARTYH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02170 574 Gene3D Cytochrome P450 28 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 Gene3D Cytochrome P450 341 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PANTHER OS08G0105600 PROTEIN 61 341 - -
Spst2g02170 574 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Spst2g02170 574 Pfam Cytochrome P450 38 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 Pfam Cytochrome P450 340 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 CDD CYP71-like 69 454 - -
Spst2g02170 574 SUPERFAMILY Cytochrome P450 38 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02170 574 FunFam Os06g0641800 protein 362 456 - -
Spst2g02170 574 Coils Coil 249 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02170 Spst-Chr2 20750389 20755257 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02170 9 458 Cytochrome P450 AT3G26310 38.000 7.27e-113 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02170 - - gmx:100801936 675.626