Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02166 ATGTCTGAACTATTAGTGCTTATCACTTTCACTTTCCTCTTCATTTTGGTGCTAAAAATAGTCTTGAATCAGAAAGCAAAATCAACTCCAAATATGCCTCCCGGGCCATGGAAGCTACCAATTATAGGGCATATGCATCATCTTCTTACGCCTGCATCACATAAAAAATTGAGAGACCTGGCTAAAATATATGGACCTTTGATGCGTCTGGAACTTGGAGGGGTGACAGCAATGATTGTTTCCTCACCTGAGTATGCCAGGGAGATAATGAAAACCCATGATGTTTTCTTTGCATCAAGGCCTCACAGTGTAACTTCAGATATATTGTCCTATGGATCCACAGGTATTGCTTCTGCCCCTTATGGAAATTATTGGAGAGTTGTACGACAGATGTGCACAATGGAGCTTTTAGGACAAAAACGTGTCAATTCATTCCAACCAATAAGAGCAGAAGAGCTCACTAATCTCATCAAAATGATTGATTCGAAGAAAGGATCACCCGTTAACCTCACTCAACTAGTACTCTCATCCATATATTCCATCATTTCAAGAGCTGCATTTGGCAATAAATGCAAAGACCAAGAAGAATTCATATCACTGGTGAAAGAAGGACTTGCAATATTGGGAGATTTATTTCCTTCTGGTAGATGGCTTCAATTTGTCACTGGTTTCAGGCATAAGATCGAGAGGTTACATCAACAAATTGATCGGATTCTTCAAAACATCATCATTGAACATAGAGAGGCAAAGTCAAAGGGCAAAGAAGACCAGGGTGAAGAAAGTGGAGATTTGGTGGATATTCTACTAAAACTTCAGGATGATAATCATGGAAACGAGAATATTTGTTTGACTGATAACAATATCAAGGCTACGATCCAGGAAATATTCGGTGCAGGAGGTGAGCCATCAGCAATTACTATAGATTGGGCAATGGCTGAGATGGTAAGGGATCCAAGAGTGATGAAGAAGGCACAAGCTGAAGTGAGAAAGGTATTCAATATGAAAGGAAGAGTTGATGACAGTTGCATCAATGAACTCAAATATTTGAAATCAGTTGTGAAGGAGACGCTAAGATTACACCCTCCAGGTCCTCTTTTACTTCCAAGAGAATGTGGAAAGAAATGTGAGATTGATGGGTATTATATACCAGCCAAAAGTATGGTAATTGTCAACGCCTGGGCTATTGGAAGAGATCCAAGCTATTGGAATGATGCAGATAGGTTTTATCCGGAGAGATTCATTGATAGCTCAATTGACTACAAAGGAAATAATTTTGAATTCCTTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGGAGCACATTTGGTTTGATAAATGTTGAGTTGGCACTTGCATTGTTGTTGTACCATTTTGATTGGAAGCTACCCAATGGAATGAAATGTGAGGATTTGGACAACACTGAGGAATTTAGAGTGACTATTAGAAGAAAAGATGACTTGTACTTGATTCCTGTATCTTCTCCTTCTTTGCTTACGATGCAAATCTGA 1509 0.393 MSELLVLITFTFLFILVLKIVLNQKAKSTPNMPPGPWKLPIIGHMHHLLTPASHKKLRDLAKIYGPLMRLELGGVTAMIVSSPEYAREIMKTHDVFFASRPHSVTSDILSYGSTGIASAPYGNYWRVVRQMCTMELLGQKRVNSFQPIRAEELTNLIKMIDSKKGSPVNLTQLVLSSIYSIISRAAFGNKCKDQEEFISLVKEGLAILGDLFPSGRWLQFVTGFRHKIERLHQQIDRILQNIIIEHREAKSKGKEDQGEESGDLVDILLKLQDDNHGNENICLTDNNIKATIQEIFGAGGEPSAITIDWAMAEMVRDPRVMKKAQAEVRKVFNMKGRVDDSCINELKYLKSVVKETLRLHPPGPLLLPRECGKKCEIDGYYIPAKSMVIVNAWAIGRDPSYWNDADRFYPERFIDSSIDYKGNNFEFLPFGAGRRICPGSTFGLINVELALALLLYHFDWKLPNGMKCEDLDNTEEFRVTIRRKDDLYLIPVSSPSLLTMQI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02166 502 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PANTHER OS08G0105600 PROTEIN 56 492 - -
Spst2g02166 502 Gene3D Cytochrome P450 23 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Spst2g02166 502 CDD CYP71-like 64 487 - -
Spst2g02166 502 Pfam Cytochrome P450 33 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 SUPERFAMILY Cytochrome P450 33 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02166 502 FunFam Cytochrome P450 71D8 25 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02166 Spst-Chr2 20723707 20725399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02166 7 492 Cytochrome P450 AT3G26300 41.165 2.24e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02166 - - pvu:PHAVU_003G009300g 738.799