Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02165 ATGGATTCTGAATTACATAACATATTAGCCCTTATCATCTCCTTTTTCCTCTTCATGATTTTGGCACTCAAAACATGGACCAATCTCAGCAAAACTGAGTCTTCAACAAACATACCCCCAGGACCATGGAAGCTACCTATCATTGGAAACATGCATAATCTTCTAACATCTACACCACACCGAAGATTAAGAGACTTGGCCAAAATATATGGTCCCTTGATGCATCTCCAACTTGGGGTGTTCGTCGCAATCGTTGTTTCCTCAGCAGAGTATGCTAAGGAGATTCTGAAAACCAATGATCTCATCTTTGCATCAAGGCCTCACATCCTAGCTGCAGATATACTGTTTTATGAATCCTCCGATATTGTTTTTTCTCGTTACGGAAATTACTGGAGACACCTACGGAAAATATGCAATATGGAGCTTTTAACCCAAAATTGTGTCAAATCATTCCAGCCAATAAGAGAAAAAGAATTCACCAGCCTTGTCAAAATCATTGATTCACATAAAGGGTCTCCCTTCAACCTCTCTGAAGCAGTACTTTCATCAATATATCATATCATTTCAAGATCTGCGTTTGGCATGAAAAGCAAAAACCAAGAACAATTCATTTCTGTGCTAAAAGAAATACCACCTGGAGCAGGTTTTAACGTAGCAGATCTATTTCCTTCTGCTAAATGGCTTCAACTTCTCACTGGTTTGAGGCCTCAGCTTGAGAAGGTGCATCGACAATTTGATCGGATATTGGGAGATATCATCGATGAACACAAAAAGCAAAAGTCAAAGGATAAAGATGGCCAAGGTGACGCAAAGGAAGATTTGGTAGATGTTCTCCTAAAATTCCAGGATGGAAATGGAAGCAACCAGGACTTTTGCTTAACTACGAACAATATCAAAGCTATAATTCTGGACATGTTTGGTGCCGGAGGTGAGACATCATCATTTACCATCATATGGGCAATGGCAGAGATGATAAGGGAGCCAAGAGTAATGAACAAAGCACAAATTGAGGTGAGAGAGACATTCGATATGAAAGGAAGGGTTGACGAAAGTTGCATTGATGAACTCAAATATTTGAAATCAGTTGTCAAGGAGACCCTAAGGTTACATCCACCAATTCCTCTATTTGCCAGAGATTGTGAACAGCCATGTGAGATTAAAGGGTATCGTATATCAGTCAAACATAAGGTAATTGTGAATGCTTGGGCTATTGGAAGAGATTCAAGCTACTGGACTGAACCTGAGAGGTTTTATCCAGAGAGATTCATTGATAACCCTATTGACCATAAAGGGACTAATTTTGATTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACCCTTGGTCTGATAAATGTTGAGCTGAGTCTTGCATTTTTGTTGTATCATTTCGATTGGAAGCTTCCTAATGGAATGAAAAAAGAGGACTTGGACATGACTGATCAATATGGGCTTACCGTTAGTAAAAAGGATGACCTATATTTGATACCAGTCACTGCTCGACCTATTCTGAATAGGGAAGCATGCATGCAGGCAAAGAAGGGTGAGTAG 1560 0.3994 MDSELHNILALIISFFLFMILALKTWTNLSKTESSTNIPPGPWKLPIIGNMHNLLTSTPHRRLRDLAKIYGPLMHLQLGVFVAIVVSSAEYAKEILKTNDLIFASRPHILAADILFYESSDIVFSRYGNYWRHLRKICNMELLTQNCVKSFQPIREKEFTSLVKIIDSHKGSPFNLSEAVLSSIYHIISRSAFGMKSKNQEQFISVLKEIPPGAGFNVADLFPSAKWLQLLTGLRPQLEKVHRQFDRILGDIIDEHKKQKSKDKDGQGDAKEDLVDVLLKFQDGNGSNQDFCLTTNNIKAIILDMFGAGGETSSFTIIWAMAEMIREPRVMNKAQIEVRETFDMKGRVDESCIDELKYLKSVVKETLRLHPPIPLFARDCEQPCEIKGYRISVKHKVIVNAWAIGRDSSYWTEPERFYPERFIDNPIDHKGTNFDYIPFGAGRRICPGSTLGLINVELSLAFLLYHFDWKLPNGMKKEDLDMTDQYGLTVSKKDDLYLIPVTARPILNREACMQAKKGE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02165 519 CDD CYP71-like 70 496 - -
Spst2g02165 519 Gene3D Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Spst2g02165 519 PANTHER OS08G0105600 PROTEIN 62 504 - -
Spst2g02165 519 SUPERFAMILY Cytochrome P450 39 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02165 519 FunFam Cytochrome P450 71D8 31 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02165 Spst-Chr2 20715177 20718955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02165 16 501 Cytochrome P450 AT3G26300 41.616 1.20e-124 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02165 - - gmx:102665189 760.755