Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02162 ATGGATTCTCAAGTACTCAACATCTTAGCCCTTACCGTGTCCTTTTTCCTCTTCATGGTTGTGGCACTCAAAATAGGGACCAATCTCAAAAAATCTGAGTCATCTCCAAACATACCCCCAGGACCATGGAAGCTACCTATCATAGGAAACATACCCCATCTTGTCACATCTACACCACACCAAAAATTAAGAGAGTTGGCTAAAATATATGGACCCTTGATGCATCTCCAACTTGGAGAGCTCTTCGCAATCATTGTTTCCTCACCAGAATATGCTAAGGAGATCATGAAAACCCATGATGTCATCTTTGCATCAAGGCCTCGAAATCTAGCTTCTGATATTATATCCTATGAATCCACAAATATCGTTTCAGCACCGTACGGGAATTATTGGAGACAGCTAAGAAAAATATGCACAGTGGAGCTTTTAACCCATAAACGTGTCAATTCTTTCAAGCCAATGAGAGAAGAGGAGCTCACCAATCTTGTCAAAATGATTGATTCACATAAAGGGTCGCCCTTCAACCTCACTGAAGCAGTGCTTCTTTCAATATATAACATCATTGCTAGAGCTGCTTTTGGCATGAAATGCAAAGACCAAGAAGAATTCATATCATTGATAAAAGAAGGCAAGACAATTGCAACAGGATTTCACATTGGAGATTTTTTTCCTTCTGTTAAATGGTTTCAACTTGTTAGTGGTTTGAAGCCTAAACTCGAGACACTGCATCAGCACTTTGATCGGATACTAGGAAGAATCATCAATGAACACATAGAAGCAAAGTCAAAATCCAGTGATGGCCAAGGTGAAGCAGAGGAAGATTTGGTAGATGTTCTCCTAAAATACCAGGATGGTAATGAAAGAAACCAGGACATTTGTTTAACTATCAACAATATCAAGGCTATAATTCTGGACATCTTTGGTGCTGGAGGTGAGACAGCAGCAACTACAATAAATTGGGCAATGGCAGAAATGATTAGGGATCCAAGAGTATTGAAGAAAACACAAACCGAGGTGAGAGAAGTATTCAATATGAAAGGAAGGGTTGATGAAGCTTGCATGGATGAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCCTTAAGACATGTGAGATTAAAGGGTATCATATACCAGCCAAAAGTAAGGTAATTGTGAATGCTTGGGCAATAGGAAGAGATCCAAAGTATTGGACTGAAGCAGAAAGGTTTCATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAGGGATTAATTTTGAGTATATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCATCACCTTTGGTTTAGTAAATGTTGAGCTGGCCCTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAAATGAGGACTTGGACATGACCGAGAAGTTTGGAATCACCGTTTCAAATGTTGAACGGGGATTGAATTTTGGCACTCAAAATAACGAGCAGTTCATCAAAACTGAGCCATCTCCAAACCTACCTCCGGGACCATGGAAGCTACCTATCATAGGAAACATACACAATCTTGTTTCATCATCACTGCACCGAAAACTAAGAGACTTGGCCACAATATATGGCCCCTTGATGCATCTCCAACTTGGGGAGGTCTTCACAATCATTGTTTCCTCACCACAGTATGCTAAGGAGATCATGAAAACCCATGATCTCATCTTTGCGTCAAGGCCTAAAATTCTGGCTTCAGATATAATGGCTTACGAATCCACAGACATTATATTTTCACCTTATGGAAAATATTGGAGGCAGCTAAGAAAAATATGCACACTGGAGCTCTTCACCCATAAACGTGTCAACTCGTTCCATCCAATAAGAGAAGAAGAGCTCACCAATCTTGTCAAAATGATTGATTCACATAAAGGGTCGCCCTTCAACCTCACCGAAGCACTACTTTCATCAGTGTATAACATCATTTCAAGAGCTGCGTTTGGCATGAAATGCGAAGACCAAGAAAAATTCATATCAGTGGTAAACGAAGCCATAACAGTTGGATCAGGTTTGAACATAGGAGATCTGTTTCCTTCTGCTAAATGGCTTCAACATTTTAGTGGTTTGAGGCCTAAGGTTGAGAGATTGCACCAACAAATTGATCGCATACTAGAAGGTATCATCAGTGAACACAGGGAGGCGAAGTTAAAAGCCAAAGAAGGCCATGGTGACCTAGGGGAAGATTTGGTAGATGTTCTCCTCAAATTCCAGGATGGTAATGATACTAACCAGGATATTTACTTAACTAATAACAATATCAAGGCTATAATCCTGGACATCTTTGCTGCTGGAGGTGAGAGCTCTCCAACTACGATTAATTGGGCAATGACTGAGATAATAAGGGATCCACGAGTTATGAAGAAAGCACAAGATGAGGTGAGAGAGGTATTCAATATGAAAGGAAGAGTTGATGGAGCTTCAATCACTGAACTCATATATTTGAAATCAATAGTCAAAGAGACCCTAAGAAGAATATGCCCAGGCATCACCTTTGGTTTAGCCAGTGTTGAGCTGACCCTTGCATCTTTGTTGTTTCACTTTGATTGGAAGCTTCCAAACGGAATGAAAAATGAGGACTTGGACCTGACTGAACAGTTTGGAGCGACTGTTAGAAGAAAGGAAGACCTATACTTGATACCACTCACTTCTCATCCTTTACTGTTCCCCATGTTACTCTCTTCTGTTACCATGGATTGTCAAATACTAAACATATTAGCCCTGATCATCTCCTTTTTCCTCTTCATGATTTTGGCACTCAAAATAAGGACCAATCTCAATAAAACTGACTCATCTCCAAACATGCCCCCTGCACCATGGAAGCTACCTATCGTAGGAAACATACACAATCTTGTTACATCAACACCACACCGAAAACTCAGAGACTTGGCCACAATATATGGCCCCTTGATGCATCTCCAACTTGGGGAGGTCTTCGCAATCATTGTTTCCTCACCAGAGTATGCTATGGAGATCATGAAAACCCATGATGTCATCTTTGCATCAAGGCCTAAAATTATGGCTTCAGATATATTAGCTTATGAATCCACAAATATAGTTTTTGCATCCTATGGAAACTATTGGAGACAGCTACGAAAAATATGCACCGTCGAGCTTTTCACACAAAAACGTGTCAGCTCATTCCAACCAATAAGAGAAGAAGAACTCACCAATCTTGTCAAAATGATTGATTCACATAAAGGGTCGCCCTTCAACCTCACTGAAGCGCTACTTTCATCAGTGTATAACATCATTTCAAGATCTGCGTTTGGCATGAAATGCAAAGACCGAGAAGAATTCATATTGATGGTAAAAGAAGCCGTGAAAATTGGATCAGGTCTTAACGTAGGAGATCTTTTTCCTTCTGCTAAATGGCTTCAACTTGCTACTGGTTTGAGGCCTAAGCTTGAGAGACTGCGTCGACAAAGTGATCGCATATTAGAAGACATCATCACTGAACACAAAGAGGCAAAGTCAAAAGGCAGAGGAGGCCAAGGTGAAGCAGAGGAAGATTTGGTAGATGTTCTTCTAAAATTCCAGGATGGTAATGATAGTAAGCAGGATATTTGCTTAACTATTGACAATATCAAGGCTATAATCCTGGACATCTTTGGTGCTGGAGGAGAGACATCTACAACTACCATTAATTGGGCAATGGCCGAGATGATAAGGGATCCTAGAGTAATGAAGAAAGCACAAGATGAGGTGAGAGAGGTATTCAATATGAAAGGAAGGGTTGATGAAACTTGCATGGATGAACTCAAATATTTGAAATTAGTTGTGAAAGAGACCCTAAGGTTACACCCACCAGCTCCTCTTTTAATTCCAAGAGAAAGTGCAGAAGCATGTGAGATTAATGGGTATCATATTCCAGTCAAAAGTAAGGTAATTGTGAATGCTTGTACAATAGGAAGAGATCCAAACTATTGGACTGAAGCAGAAAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGACTACAAAAAGAATAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCATGACACTTGGTTTGATGAATGTTGAGCTGGCACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAAATGAGGATTTGGACATGACTGAGCAATTTGGAGTGACTGTTGGAAGAAAAGATGACCTATACTTGATACCTGTCACTTCTCCACCTTTTCTGAGCTGA 4254 0.401 MDSQVLNILALTVSFFLFMVVALKIGTNLKKSESSPNIPPGPWKLPIIGNIPHLVTSTPHQKLRELAKIYGPLMHLQLGELFAIIVSSPEYAKEIMKTHDVIFASRPRNLASDIISYESTNIVSAPYGNYWRQLRKICTVELLTHKRVNSFKPMREEELTNLVKMIDSHKGSPFNLTEAVLLSIYNIIARAAFGMKCKDQEEFISLIKEGKTIATGFHIGDFFPSVKWFQLVSGLKPKLETLHQHFDRILGRIINEHIEAKSKSSDGQGEAEEDLVDVLLKYQDGNERNQDICLTINNIKAIILDIFGAGGETAATTINWAMAEMIRDPRVLKKTQTEVREVFNMKGRVDEACMDELKYLKSVVKETLKTCEIKGYHIPAKSKVIVNAWAIGRDPKYWTEAERFHPERFIDSSIDYKGINFEYIPFGAGRRICPGITFGLVNVELALAFLLYHFDWKLPNGMKNEDLDMTEKFGITVSNVERGLNFGTQNNEQFIKTEPSPNLPPGPWKLPIIGNIHNLVSSSLHRKLRDLATIYGPLMHLQLGEVFTIIVSSPQYAKEIMKTHDLIFASRPKILASDIMAYESTDIIFSPYGKYWRQLRKICTLELFTHKRVNSFHPIREEELTNLVKMIDSHKGSPFNLTEALLSSVYNIISRAAFGMKCEDQEKFISVVNEAITVGSGLNIGDLFPSAKWLQHFSGLRPKVERLHQQIDRILEGIISEHREAKLKAKEGHGDLGEDLVDVLLKFQDGNDTNQDIYLTNNNIKAIILDIFAAGGESSPTTINWAMTEIIRDPRVMKKAQDEVREVFNMKGRVDGASITELIYLKSIVKETLRRICPGITFGLASVELTLASLLFHFDWKLPNGMKNEDLDLTEQFGATVRRKEDLYLIPLTSHPLLFPMLLSSVTMDCQILNILALIISFFLFMILALKIRTNLNKTDSSPNMPPAPWKLPIVGNIHNLVTSTPHRKLRDLATIYGPLMHLQLGEVFAIIVSSPEYAMEIMKTHDVIFASRPKIMASDILAYESTNIVFASYGNYWRQLRKICTVELFTQKRVSSFQPIREEELTNLVKMIDSHKGSPFNLTEALLSSVYNIISRSAFGMKCKDREEFILMVKEAVKIGSGLNVGDLFPSAKWLQLATGLRPKLERLRRQSDRILEDIITEHKEAKSKGRGGQGEAEEDLVDVLLKFQDGNDSKQDICLTIDNIKAIILDIFGAGGETSTTTINWAMAEMIRDPRVMKKAQDEVREVFNMKGRVDETCMDELKYLKLVVKETLRLHPPAPLLIPRESAEACEINGYHIPVKSKVIVNACTIGRDPNYWTEAERFYPERFIDSSIDYKKNNFEYIPFGAGRRICPGMTLGLMNVELALAFLLYHFDWKLPNGMKNEDLDMTEQFGVTVGRKDDLYLIPVTSPPFLS 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02162 1417 Pfam Cytochrome P450 946 1397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 Pfam Cytochrome P450 39 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 Pfam Cytochrome P450 504 834 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 Gene3D Cytochrome P450 835 890 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 SUPERFAMILY Cytochrome P450 946 1409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1348 1357 IPR017972 GO:0005506|GO:0016705
Spst2g02162 1417 PANTHER OS08G0105600 PROTEIN 834 895 - -
Spst2g02162 1417 PRINTS P450 superfamily signature 1216 1233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS P450 superfamily signature 1269 1280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS P450 superfamily signature 1346 1355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS P450 superfamily signature 1355 1366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 CDD CYP71-like 977 1405 - -
Spst2g02162 1417 CDD CYP71-like 70 478 - -
Spst2g02162 1417 SUPERFAMILY Cytochrome P450 39 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 FunFam Cytochrome P450 71D8 496 835 - -
Spst2g02162 1417 FunFam Cytochrome P450 71D8 938 1409 - -
Spst2g02162 1417 SUPERFAMILY Cytochrome P450 502 890 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 Gene3D Cytochrome P450 29 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 Gene3D Cytochrome P450 495 834 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Spst2g02162 1417 Gene3D Cytochrome P450 938 1404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 FunFam Cytochrome P450 71D8 31 484 - -
Spst2g02162 1417 PRINTS E-class P450 group I signature 1090 1108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 1268 1286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 974 993 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 998 1019 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 1205 1222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 1225 1251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 1355 1378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 1309 1333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g02162 1417 PRINTS E-class P450 group I signature 1345 1355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02162 Spst-Chr2 20611640 20634580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02162 834 891 Cytochrome P450 AT3G26300 53.448 1.05e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02162 - - fve:101308399 921.768