Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02137 ATGGCCAAAGAAGACCAGAGATTTGCCATAGGAATCGACCTTGGTACAACGTATTCGTGCGTAGCAGTGTGGCTGGAGCAACATGAAATAGCTGTCACCAATCCCGAAAACACTGTTTTTGGTGCTAGGAGGTTAATTGGTAGGAAATACAGTGATCCCATTATTCATAAAGAGAAAATGTTATGGCTATTCAAGGTTGTTGCAGGTGTTAATGACAAGCCCATGATCGTGGTTAAATACAAGGTAAAGCGCCTTTGTGCAGAAGAAATATCTTCTATGCTTCTCATGCAAATGCGGGAGATTGCAGAGACATATTTGGAAACACCTGTGAAAAATGTTGTTGTCACAGTGCCTGCTTATTTCAACGACTCTCAGCCTAAAGCTACCAAAGATGCTGGTGTCATTGCTGGCCTCAATGACAAGGTCTTCCAAGTTAGGGCTACTGCTGGAAACACTCATCTAGGGGGAGAGGATTTTGACAATAGAATGGTGAACTACTTTGTGAAGGAGTTCAAAAGTAAAAACAAAGTGGATATTAGCGGGAAGCCAAAAACCCTAAAGAGGTTGAGAACTGCATGTGAGCGCGCAAAAAGAATTCTTTCATTTGTAGTCACTACCACCATTGAGTTAGATGCCTTATTTACGGGCATTGACTTCTTCTTAATCACTGGTGCAAAGTTTGAGCAAATTAATATGGAGCTCTTTGAAGAGTGTATACAGACAGTTGATAGATGTCTTACTTATGCTAAAATGGACAAGAACAGTGTAGATGATATTGTCCTTGTTGGTGGTTCCTCTAGGATTCCAAAAGTGCAGGAACTATTGCAGGACTTCTTTAATGGAAAGGATCTGTGCAAGAGCATCAACCCTGACGAGGCTATTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGTTGAATGAAGGCATGAAGAATGTTTCAAACTTGGAGCTACTGGATATTACACCTCTATCCCTTGGTGTAAAGACAAAAGACGATGTCATGAGTGTGGTCATCCCCAGGAACAATACCATTCCTGTGAGGAAGACAGAAGTATTCTTTAGAGTAAATGATACCCAATATCAAGTTCCTATTGAAGTGTACGAGGGGGTGAGAGCAAAAGCCACTGATAACAATTTGTTAGGTTCTTTTGTTCTTTCTGGTTTTCCTCCTGTTCCTCGTCGCCATCCTTTGGATAATGAGATTATCATAACCAATGACAAAGAAAGACTGTCACCTGAAGCAATGATGAGAATGATTCACGAAGCTGAGAATTTTCAGGCTGAAGACAAGAAGTTCCAGAGGAAGGCCAAGGCAATGAATTGTTTGGATCATTACAAGATTAGTTCTGCCATTAGGAAGACTACAAATTTGCTGGATGGTAAAAATCAGCATGATGAAGTATATGTATTTGAAGATCATCTGAAGGAGATGCTTGTGAGCCTCTATGAAAACACAATAGGCGAGATTGGTTAG 1473 0.4094 MAKEDQRFAIGIDLGTTYSCVAVWLEQHEIAVTNPENTVFGARRLIGRKYSDPIIHKEKMLWLFKVVAGVNDKPMIVVKYKVKRLCAEEISSMLLMQMREIAETYLETPVKNVVVTVPAYFNDSQPKATKDAGVIAGLNDKVFQVRATAGNTHLGGEDFDNRMVNYFVKEFKSKNKVDISGKPKTLKRLRTACERAKRILSFVVTTTIELDALFTGIDFFLITGAKFEQINMELFEECIQTVDRCLTYAKMDKNSVDDIVLVGGSSRIPKVQELLQDFFNGKDLCKSINPDEAIAYGAAVQAALLNEGMKNVSNLELLDITPLSLGVKTKDDVMSVVIPRNNTIPVRKTEVFFRVNDTQYQVPIEVYEGVRAKATDNNLLGSFVLSGFPPVPRRHPLDNEIIITNDKERLSPEAMMRMIHEAENFQAEDKKFQRKAKAMNCLDHYKISSAIRKTTNLLDGKNQHDEVYVFEDHLKEMLVSLYENTIGEIG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02137 490 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Spst2g02137 490 FunFam heat shock 70 kDa protein-like 40 93 - -
Spst2g02137 490 PRINTS 70kDa heat shock protein signature 288 308 - -
Spst2g02137 490 PRINTS 70kDa heat shock protein signature 314 333 - -
Spst2g02137 490 PRINTS 70kDa heat shock protein signature 8 21 - -
Spst2g02137 490 PANTHER HEAT SHOCK PROTEIN 70KDA 142 452 IPR013126 GO:0005524|GO:0140662
Spst2g02137 490 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 311 442 IPR029047 -
Spst2g02137 490 FunFam Heat shock 70 kDa 155 237 - -
Spst2g02137 490 Pfam Hsp70 protein 139 395 IPR013126 GO:0005524|GO:0140662
Spst2g02137 490 Gene3D Actin; Chain A, domain 4 156 237 - -
Spst2g02137 490 Gene3D - 286 303 - -
Spst2g02137 490 Gene3D - 40 93 - -
Spst2g02137 490 SUPERFAMILY Actin-like ATPase domain 8 143 IPR043129 -
Spst2g02137 490 Gene3D - 30 139 - -
Spst2g02137 490 SUPERFAMILY Actin-like ATPase domain 138 305 IPR043129 -
Spst2g02137 490 ProSitePatterns Heat shock hsp70 proteins family signature 3. 259 273 IPR018181 -
Spst2g02137 490 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 305 399 IPR029047 -
Spst2g02137 490 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 400 461 IPR029047 -
Spst2g02137 490 Gene3D - 1 28 - -
Spst2g02137 490 Gene3D - 141 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02137 Spst-Chr2 20320187 20322530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02137 1 477 Calmodulin-binding Proteins AT3G12580 49.671 0.0 545