Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02133 ATGAGTTTGGTTCCTGAAGACTTACCGAGCTTAGATTTGAGACCTTTTTTTGTTACCAAAACTATCACTGATCTTCTCAGCCACCTTTCCTCCACCCCAAATGCTTCCCACAAGAGTTGCTTGCTCGAAGACTTTCTCAACAGATTGGAACTCGAATTGGACAAGATCCAAGCGTTCCAACGCGAACTTCCTCTCTGCATGTTCCTCTTAAATGATGATGGTTTGAGTTTATTTTTCTCTTCAAGTTTCAATGAATGCACTAATACGAGCACTGTTCTTGTTTTTGTGGTGGCAGCAATTTCAGCTTTGAAGGCGGAGTTAGAAAAATGCAGAACTTACAAGTCTGAGCCTGTTTTGGAGGAGTTCATTCCTCTGAAGAAAGAGTATCAAGAGAAGAAGGTTAGTGAGAAGGAAAAGGAATGCAGGGACAACAATAATTGGACGAGTTCTTTTCAGCTTTGGAACACTGACGAAGCTTATAAAAGGGACAATGCATATAGATTGGACCAACAACAAAACAAGAGTAATGAAGAAGAAAGACAATCTGTGGCCAAGGACTATTTCCAATATGCTGGAAATAGAAATGTAGAAAGGGGATTTGTTATGCCTTTGTCCACTTACCTTCTAACAAAGGAAGAATGTGATGTCAATGAACTTTCTCTTCAGACACCTGAAACTGCAGTGAGAAGCAAAAGGGAAAGATGTGGTTCCAGAATCACATCTTGCAGGGTGGTTTCCTCCATCTCTTCGCACCTGCTGCAGCCTCAAAGTGGCCGGAAACAAAGGAGGTGCTGGTCGCCGGAGTTGCATCACCGCTTTGTTAAAGCATTAGAGGAGCTTGGAGGCTCTCAAGCAGCTACTCCAAAGCAAATTAGGGAACTCATGAGGGTTGATGGCCTGACCAACGATGAAGTAAAGAGTCATTTGCAAAAATACCGACTTCATACAAGGAGAGTTCCAGTTGCTACAACTGCAGGAGGCTTATGGATGCACAAAGAATCCTTGAAGGGTAGCAGTTCTGGTTCTCCTCAAGGCCCTCTCCAATTAGCTACACAATCTGGGGAAGCGACATCCAGAACAGAAGGTGGCAACATGATAGATGATGATGTAAAATCGGAGGATGGATTTATGAAGAGAGGCTTTTACCGTTTTGAAGGACCAGTTTTCCTTCTATGCTATGAGTTTTCAAATGATACTCCGAAGAAATTTTGTGAAAGAGCTTTTGAAAAGTATGGAATTATTGGTGATGTTGAATGGAAAAAAATTGGATATCTCAATTTGGGTAACAATGCAGAGTTAAGTGTTTCTGCTTCATTCATTGAGTTAGCAAAATGTGACCTTCAACCTAGGGATATTTGGTGA 1362 0.417 MSLVPEDLPSLDLRPFFVTKTITDLLSHLSSTPNASHKSCLLEDFLNRLELELDKIQAFQRELPLCMFLLNDDGLSLFFSSSFNECTNTSTVLVFVVAAISALKAELEKCRTYKSEPVLEEFIPLKKEYQEKKVSEKEKECRDNNNWTSSFQLWNTDEAYKRDNAYRLDQQQNKSNEEERQSVAKDYFQYAGNRNVERGFVMPLSTYLLTKEECDVNELSLQTPETAVRSKRERCGSRITSCRVVSSISSHLLQPQSGRKQRRCWSPELHHRFVKALEELGGSQAATPKQIRELMRVDGLTNDEVKSHLQKYRLHTRRVPVATTAGGLWMHKESLKGSSSGSPQGPLQLATQSGEATSRTEGGNMIDDDVKSEDGFMKRGFYRFEGPVFLLCYEFSNDTPKKFCERAFEKYGIIGDVEWKKIGYLNLGNNAELSVSASFIELAKCDLQPRDIW 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02133 453 MobiDBLite consensus disorder prediction 333 369 - -
Spst2g02133 453 MobiDBLite consensus disorder prediction 335 360 - -
Spst2g02133 453 NCBIfam myb-like DNA-binding domain, SHAQKYF class 260 315 IPR006447 GO:0003677
Spst2g02133 453 Pfam Myb-like DNA-binding domain 262 313 IPR001005 -
Spst2g02133 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 317 IPR017930 -
Spst2g02133 453 SUPERFAMILY Homeodomain-like 258 318 IPR009057 -
Spst2g02133 453 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 364 IPR044787 GO:0003700|GO:0006355
Spst2g02133 453 Coils Coil 42 62 - -
Spst2g02133 453 Gene3D - 259 317 - -
Spst2g02133 453 FunFam Myb family transcription factor 259 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02133 Spst-Chr2 20296893 20299867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02133 10 337 G2-like Transcription Factor Family AT2G03500 38.095 4.25e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst2g02133 Myb_DNA-binding 6.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02133 - - vra:106776390 484.567