Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02105 ATGATGACACCAAACTTGAACCTGGATCCTGAAGATAATGTAAAAATCTGCGGCCAAGTAGGATCAGATGAAATGCTACAAGAAACAACACATGATTTTACTATGGACAACATCACCGGTTCCTCGTGTCTTACCAAGGCTGATCCTGATCCAGGTTCTCTATCCCTTGACTTGACCCTCAACTTCAATCCCGGTGAGGAAGAGTTGAAAGGCACAGGTGATCCTGGCTGTGAAGTAGGAGGTGAAATTCATGCCTCAGCATCAGCAATTCCAAGAATTTTCTCTTGTAACTATTGTCGCCGGAAGTTCTTTAGCTCGCAGGCATTAGGTGGCCATCAGAATGCTCACAAAAGGGAGAGGACAATGGCGAAGCGTGCAATGCGAATGGGGATGTTCGCGGACAGGTACACTAGCCTTGCATCTCGGCCTCTTCATGGTTCTGCTTTTCGGTCCCTTGGACTTGAAGCTCATGCTGCAATGCACCAAGGACATGTGCATTCACTGAGGGCTCCTGATATGAGGGCTGCGGCAAAATTCGGGAAAGACTATTTTCGAACACCAATCTTTGTTGAAGATGATGATGTTGGTCTGTTTTGGCCTGGCAGTTTCAGACAGGTAGATGAAAGGGTTGGCACTGTTGTTAATCTGAGGCATGATGAACATGCTCATAATTCAAGTACTAGGTTTGTAGCAACTGATGCTCCAGCACAGACATCTGCATCTCCTGATCTCACTCTGAGGCTTTGA 747 0.4659 MMTPNLNLDPEDNVKICGQVGSDEMLQETTHDFTMDNITGSSCLTKADPDPGSLSLDLTLNFNPGEEELKGTGDPGCEVGGEIHASASAIPRIFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFADRYTSLASRPLHGSAFRSLGLEAHAAMHQGHVHSLRAPDMRAAAKFGKDYFRTPIFVEDDDVGLFWPGSFRQVDERVGTVVNLRHDEHAHNSSTRFVATDAPAQTSASPDLTLRL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02105 248 Gene3D Classic Zinc Finger 83 140 - -
Spst2g02105 248 FunFam Zinc finger protein 2 81 140 - -
Spst2g02105 248 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
Spst2g02105 248 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Spst2g02105 248 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Spst2g02105 248 MobiDBLite consensus disorder prediction 228 248 - -
Spst2g02105 248 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 89 167 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02105 Spst-Chr2 20124496 20125242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02105 88 248 C2H2 Transcription Factor Family AT1G66140 43.784 1.53e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g02105 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02105 - - gmx:100777133 410.223