Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02096 ATGTCTCTTGCTTGGTCTTCCATTATATGTCTCTTTCTTTTAGCAAGCGTTGAAGCAGTGTCAGCAGCACATATATATCAAGGTCAACAAGACCTTCGTCACAGTGGCCAAAAACAGTTTCAGAAGAAAGCAGTTTCTCGTCACAAGGCAATTATAGTTGACAAATCTGGGCATGGAGACTTCTCCAAGATACAGTCTGCCATTGATTCTGTCCCTTCCAACAACAAGCATTGGGTTCACATCAAAGTCAAGGCAGGCATTTACAGGGAGAAGGTGAACATTCCTGGTGACAAGCCTCACATAGTCCTACAAGGTGAGGGGAAAAAGAAGACCATTGTTGATTGGGCTGACCATGATTCAAGTGCACAGAGTCCTACATTTCTAACCATGGCTAACAATATCGTGGTGAAGTCCATGAGCTTTAGGTTTATTTTTGTGGTGAATCATGTTGAGCAGAATTCATACAATTATCCAAAATATGTGCACTCCATGACACCTGCAGTAGCTGCAATGATAAGTGGAGACAAGTCTTCGTTCCACAACGTTGGCTTCTATGGTTTGCAAGACACTTTGTGGGATGAGCAAGGAAGACACTACTTCAATTCATGCACCATTCAGGGTGCCATGGATTTCATCTTTGGCACTGGACAATCTTTGTACGAGAGGTGTAGCATATCAGTTCTTGAAGCGTGTCCAGGTGAAGCTGTTATCGGTTTCATCACTGCCCAAGGGAGAACAGGTCCTAACGATGCAAATGGGTTTGTTTTTAAGAACTGCAATATCCATGGTTTTGGAAAAACATACTTGGGAAGACCATGGAGAGGTTATGCCAGAGTTCTTTTCTACCAAACTAAAATGTCTGACATTGTCCAACCACTAGGTTGGCAGCCATGGAATTCCGCTGGGCACGAGGGTAGAATAACGTTCGCAGAGGAGGATAATTTTGGACCTGGTTCCAACACGTCTCAGCGAGTGAGTTGGTTGAAGAAATTGAGTCCATTAACAGTGAAGGAAATGACAAGTACTCGTTTTGTGGACATGGAAGGTTGGCTCAATATCCATCACCGCTTATAA 1074 0.4348 MSLAWSSIICLFLLASVEAVSAAHIYQGQQDLRHSGQKQFQKKAVSRHKAIIVDKSGHGDFSKIQSAIDSVPSNNKHWVHIKVKAGIYREKVNIPGDKPHIVLQGEGKKKTIVDWADHDSSAQSPTFLTMANNIVVKSMSFRFIFVVNHVEQNSYNYPKYVHSMTPAVAAMISGDKSSFHNVGFYGLQDTLWDEQGRHYFNSCTIQGAMDFIFGTGQSLYERCSISVLEACPGEAVIGFITAQGRTGPNDANGFVFKNCNIHGFGKTYLGRPWRGYARVLFYQTKMSDIVQPLGWQPWNSAGHEGRITFAEEDNFGPGSNTSQRVSWLKKLSPLTVKEMTSTRFVDMEGWLNIHHRL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02096 357 SUPERFAMILY Pectin lyase-like 49 353 IPR011050 -
Spst2g02096 357 Gene3D - 45 356 IPR012334 -
Spst2g02096 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 40 352 - -
Spst2g02096 357 FunFam Pectinesterase 45 355 - -
Spst2g02096 357 Pfam Pectinesterase 51 346 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02096 Spst-Chr2 20084760 20086677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02096 49 304 Carbohydrate Esterase AT2G19150 43.191 1.43e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02096 - - gmx:100812950 430.639