Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02049 ATGGTAAAATGGCCCTTCATGAACAAAGTATCTGTCCATCCTCATTTGATGTCTTTCAATGCTCCTCAGAAATCTGTCAATCATGATGGACAAGGTGGCATTCATTTTTCCCTGACACCATACCCTGCACTAGATGATGTGAATTCTATGAATCGCCCTGATGATGCGAAGATGTTTTTAGTTCCCAATCAAGCCAACTCAGTTCCCATGGGACATCCATCCCCAAAGAATCATTTTACAACTGTTGGTCAGAATATGAATGGTTCTAGTATGAAGCAACCACTACTTGGGGGAATACCTGTTATAGCACCTCATTCAGTTCTTCCTATAATTGGTATTGGTGCTGTTGCTGGAATGACCAAAACATGTGTGAAATCTTCTATGTCTGCTCCTAAACTTACCATCTTCTACGCGGGCACTGTGAATGTCTTTGATGATATCACTCCTGACAAGGCACAAGCTATCATGTTGATGGCTGGGAGTGGATTATCAGCTGCTTCTAATGTGGCACCTCCAAATGTTCAGGCTCCCAGATTGACTTTGGCAGTAGGTGATGGTGTTCCTGTTAGTAAACCCTTACCACCATGCCCTAATCTTTCAACCCCTTTATCTGTTTCTTCACATACTGGTGCTCAGTCAAGGAGTGGTTCAAGTAGCAGTGATGAATTTCTGTCTGCTAAAACATCTGGTGATACCCCTACTTCTGTTAACAAAGTGGAGACTCCTAAAGTAGTCAACACAACCACCATGCTACCATCAGCTGTGCCACAGGCTCGCAAGGCATCATTGGCTCGGTTTTTGGAGAAGCGCAAGGAAAGGGTGTTGAATGCAGCACCATATAACCTGAAAGAGAATTTTGAGAATATGCCACAGCAGAATAAACTTGTTTCTAAAATGAATGCAAGTGAGGGTGGTGATGCACCATCAACCAAGCAAGGATAG 942 0.4331 MVKWPFMNKVSVHPHLMSFNAPQKSVNHDGQGGIHFSLTPYPALDDVNSMNRPDDAKMFLVPNQANSVPMGHPSPKNHFTTVGQNMNGSSMKQPLLGGIPVIAPHSVLPIIGIGAVAGMTKTCVKSSMSAPKLTIFYAGTVNVFDDITPDKAQAIMLMAGSGLSAASNVAPPNVQAPRLTLAVGDGVPVSKPLPPCPNLSTPLSVSSHTGAQSRSGSSSSDEFLSAKTSGDTPTSVNKVETPKVVNTTTMLPSAVPQARKASLARFLEKRKERVLNAAPYNLKENFENMPQQNKLVSKMNASEGGDAPSTKQG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02049 313 MobiDBLite consensus disorder prediction 289 313 - -
Spst2g02049 313 Pfam Jas motif 256 280 IPR018467 -
Spst2g02049 313 SMART tify_2 126 161 IPR010399 -
Spst2g02049 313 MobiDBLite consensus disorder prediction 193 243 - -
Spst2g02049 313 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 65 289 IPR040390 -
Spst2g02049 313 ProSiteProfiles Tify domain profile. 126 161 IPR010399 -
Spst2g02049 313 MobiDBLite consensus disorder prediction 200 243 - -
Spst2g02049 313 Pfam tify domain 131 160 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02049 Spst-Chr2 19667558 19669386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02049 2 284 Tify Gene Family AT3G17860 34.754 4.10e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Spst2g02049 tify 2.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02049 K13464 - gmx:100799314 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02049 2 19667558 19669386 Spst2g02049 2 19667558 19669386 ECH