Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02000 ATGGACAAAACTCCTCATCTATGGAAACCAAACAAGGATCCTTTCATCTCGCTTGGAGTTTTAAGCTGTTCTCCACTTGATGAACTTTGTGGGTTTAAGTTCAAATCAAGAGGCGCAAAAGGGCATACTGATTTTCAGAAGACTATTGGGGACACGCAGCAGCAATGGCCTAAGCTCAGCTCTTTGACTAAGTTGAAATCACCCCTCAATAAAGACTTATCAGTAAACTTGAGCACCCTGGGAATCCACAAGACTGTAACAAGTAAAACTCATGACAAAATTCTCAACAAAAAGGCCATACCATCAAATAACCCCAAAGATATTTCTGATAAGAATGACAAGACTAATCTATTTGCCATGAATGATTCAGTGGACTCCATTAAGAGCGCCATGACCAAACCCAGCACTTTCTTTCACAATCTCATCAAGCCCTTCAAATTCAGTTCCAGTAAAGAGGAACAAAGCGAAGACGATATACAGAACTTAGCTGCACAGGAGAACAAGATCTTCCCCTACGAAACATTGGTTGCTGCTACAAACCAATTTGACATTCTTAACAAGCTTGGTGAGGGAGGATTTGGACCCGTTTATAAGCTAAAGGGGAAACTGAGTGACGGTAGAGAGATTGCGGTGAAGAAGTTATCGCGTAGATCGAATCAAGGGAAGACGCAGTTCATAAACGAGGCGAAGTTGTTAGGTCGTGTGCAGCACCGAAATGTGGTGAATCTGATCGGTTACTGCGCCCATGCCTCCGAGAAGCTTCTTGTTTACGAGTATGTCCCTCGCAAGAGCCTCGACAAGCTTCTCTTCGAATCGGGGAAGAAAAAGGAGCTAGATTGGAAACGGAGATTTGACATAATCAGTGGGGTGGCAAGGGGTTTGCTTTATCTTCACGAAGACTCTCACAACTGCATAATCCATCGCGACATAAAGGCCAGTAACATCTTACTCGATCAAAAATGGGTGCCCAAGATAGCTGATTTTGGCCTCGCACGACTCTTCCCGGAAGACCAAACCCACGTCAATACACGTGTGGCTGGAACCAATGGGTATTTGGCTCCAGAATATTTAATGCACGGACATTTGTCTGTGAAGGCAGACGTATTTAGCTACGGAGTTTTGGTGTTGGAATTGGTCACTGGCCACCGAAATTCATCCTTTGATACCGACGCCACTGCGCAAAATCTCCTCGACTGGGCATACAGGCTATACAAGAAAGGAAGGGCATTGGAAATGGTGGACCCTGCATTGGGCTCTTCAGTGATAACTGAACAGGTAGAAATGTGCATTAAACTGGGTCTGTTGTGCACTCAAGGTGATCCAAACCTACGTCCAACCATGGGGCGTGTGGTGGTAATGCTGTCAAAGAAAACAAGCCACACGGAAGAACCAACAAGACCAGGAATGCCTGGTTCCAGATACAGAAGAGTGCCTCGCAGACCCTCTGCAATGTTTTCTTCTGGGGTTGATGATGACTCTCATTCACAAACTTATGATTCAAGCAACTCTGGCACTAATAATACTACTTCTGCACCAACAACACCCAGCTCCAGTGCTACTGCAGAAGTAGACCCCCGAGGGAAACGACCAATGCAAGGTTAG 1602 0.4538 MDKTPHLWKPNKDPFISLGVLSCSPLDELCGFKFKSRGAKGHTDFQKTIGDTQQQWPKLSSLTKLKSPLNKDLSVNLSTLGIHKTVTSKTHDKILNKKAIPSNNPKDISDKNDKTNLFAMNDSVDSIKSAMTKPSTFFHNLIKPFKFSSSKEEQSEDDIQNLAAQENKIFPYETLVAATNQFDILNKLGEGGFGPVYKLKGKLSDGREIAVKKLSRRSNQGKTQFINEAKLLGRVQHRNVVNLIGYCAHASEKLLVYEYVPRKSLDKLLFESGKKKELDWKRRFDIISGVARGLLYLHEDSHNCIIHRDIKASNILLDQKWVPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMHGHLSVKADVFSYGVLVLELVTGHRNSSFDTDATAQNLLDWAYRLYKKGRALEMVDPALGSSVITEQVEMCIKLGLLCTQGDPNLRPTMGRVVVMLSKKTSHTEEPTRPGMPGSRYRRVPRRPSAMFSSGVDDDSHSQTYDSSNSGTNNTTSAPTTPSSSATAEVDPRGKRPMQG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02000 533 CDD STKc_IRAK 188 456 - -
Spst2g02000 533 SUPERFAMILY Protein kinase-like (PK-like) 167 473 IPR011009 -
Spst2g02000 533 ProSiteProfiles Protein kinase domain profile. 182 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02000 533 MobiDBLite consensus disorder prediction 455 533 - -
Spst2g02000 533 FunFam Cysteine-rich receptor-like protein kinase 10 261 466 - -
Spst2g02000 533 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 506 - -
Spst2g02000 533 Pfam Protein kinase domain 183 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02000 533 Gene3D Phosphorylase Kinase; domain 1 144 259 - -
Spst2g02000 533 SMART serkin_6 182 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02000 533 Gene3D Transferase(Phosphotransferase) domain 1 260 467 - -
Spst2g02000 533 FunFam Cysteine-rich receptor-like protein kinase 10 146 259 - -
Spst2g02000 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Spst2g02000 533 MobiDBLite consensus disorder prediction 488 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02000 Spst-Chr2 19003370 19019242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02000 150 469 Receptor kinase-like Gene Family AT4G11530 50.311 4.82e-109 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst2g02000 Pkinase 4.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02000 - - gmx:100811523 639.032