Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01998 ATGACATTGACACGCCATTCCCTCCTTTCTCTGTTATTCTTCGCATCCACTCTCTCTAATCTCGCCTTTACCGTCACCGCCGGTGACGTTTCCGGTGACACCGACTTCATTCGTGAAAGCTGCAACACAACGTTGTACCCTGACCTGTGCTTCTCCTCGCTCTCTCGCTACGCCGGCGCGGTGCAACGCAGTCCCGCCGGCCTTGCGCGAGTGGCCGTTGCCGTGGCGCTCGCCAAGGCGCACGGCGCGACGGCCTACCTCTCACATCAGACCGCCGCGGTAGTTGACGAGGAGTCCGACGCCGGTGCGGCCGTGCACGACTGCATCGCGAACCTGGAGGACGCGGTGGACGAGATCCGCGGCTCGCTGAAGCAGATGAGGCGGCTCAGACCGGAGGATAACTCCGGTGCGGTCCGGTTCGGGGTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACCGACGGGTTCGAGGGCGTAGAGGAAGGTCCCATGAAGAAGAGCGTGTGCGATCGCGTGACCAGGGTGAAGAAGTTCACCAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTAATAAATTATAA 603 0.6119 MTLTRHSLLSLLFFASTLSNLAFTVTAGDVSGDTDFIRESCNTTLYPDLCFSSLSRYAGAVQRSPAGLARVAVAVALAKAHGATAYLSHQTAAVVDEESDAGAAVHDCIANLEDAVDEIRGSLKQMRRLRPEDNSGAVRFGVSNVLTWMSAALTDEETCTDGFEGVEEGPMKKSVCDRVTRVKKFTSNALALVNGFANKL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01998 200 Coils Coil 109 129 - -
Spst2g01998 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 196 IPR035513 -
Spst2g01998 200 NCBIfam pectinesterase inhibitor domain 10 194 IPR006501 GO:0004857
Spst2g01998 200 CDD PMEI-like_3 40 198 - -
Spst2g01998 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 192 - -
Spst2g01998 200 SMART PMEI_2 32 192 IPR006501 GO:0004857
Spst2g01998 200 Pfam Plant invertase/pectin methylesterase inhibitor 35 192 IPR006501 GO:0004857
Spst2g01998 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01998 Spst-Chr2 18994463 18995065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01998 8 192 Carbohydrate Esterase AT3G49220 28.723 1.06e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01998 - - gmx:100797734 276.944