Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01957 ATGAAACCGAAGGAGGACGAGGTTTCTACCATTCACAACGAGGGAACGATCTTGAAGGGAATTGGAGCGATTGAGATTGGTGTTGGGTTAGGTATTCTGGGTCTTCTCAAATTTCGAATTATAAGAGGAATTAATCTTGCAATTCGCGACGCCATTAAAGGACGCGCCAGTGACCCTTATGTGGTCCTCAACGTCGGCGATCAGAAGCTGAAGACTTCTGTTATAAAAAACAACTGCAATCCTGAGTGGAATGAAGAAAGGACCATTTCTATAAAGGATGTTACAACCCCAATACACCTTTCAGTTTACGACAAAGACACGTTCTCAGTGGATGACAAGATGGGAGACGCAGACATAGACTTGAAGCCCTATATTCAGTGTGTGCAAATAATGGGGTTGAATAAGCTCCCAAATGGTTCTGTTGTCATGACCTTTCAACCAGATGAAACCAATTGCCTTTCTCAAGAAAGTTGCTGCATTTGGCGAAACGAAAATATCGTCCAAGAAATGACTTTGGGATTGAAAAATGTTGAGAGTGGGGAATTAGTTGTGGAAATTGAGTGGGTTGATGTTATTGGTTGCAGGGGCTTATCACATTTACAATTTTAA 609 0.4171 MKPKEDEVSTIHNEGTILKGIGAIEIGVGLGILGLLKFRIIRGINLAIRDAIKGRASDPYVVLNVGDQKLKTSVIKNNCNPEWNEERTISIKDVTTPIHLSVYDKDTFSVDDKMGDADIDLKPYIQCVQIMGLNKLPNGSVVMTFQPDETNCLSQESCCIWRNENIVQEMTLGLKNVESGELVVEIEWVDVIGCRGLSHLQF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01957 202 Pfam C2 domain 35 123 IPR000008 -
Spst2g01957 202 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 32 193 IPR044562 -
Spst2g01957 202 SMART C2_3c 35 133 IPR000008 -
Spst2g01957 202 Gene3D C2 domain 33 193 IPR035892 -
Spst2g01957 202 ProSiteProfiles C2 domain profile. 13 134 IPR000008 -
Spst2g01957 202 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 34 146 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01957 Spst-Chr2 18615247 18617777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01957 69 199 C2H2 Transcription Factor Family AT1G70790 55.303 2.31e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01957 - - gmx:100784381 264.233