Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01953 ATGGAGCAAAGGAACACAGACACTCGTGTGGATGCAAATCCAAATCCCACTCACAAAGAATCACAGCCTTTGAAAAAGAAGCGCGGCCGAAAAAGTAAAAAGGTGAAGGAGGACATGGAAAAGAAGAAAATTTTAGATACTACTGCCGTGGAGGGTGGGGTTTCCGAGCAGCGACCAAGTAGAAAAAGAAAGAATGATGATGGAAATTGTGAGTTTGAAATGTCTGGCGCTGACAAACCATATGGTCTTAGGGGTCGTAAACAGGAGATGATACCAAAAGTCATCAAGAAAAGGGCTAAGGAGGATATTGCTGAGGCATGTCCAGTGTGCCGTGGTAATTGCAATTGCAAAGCTTGCCTGAGCTCTGATGAACTTATTAATCAAATGAAGAAAAATGCAATCAGTGATAAAGACGAGAAGGTTGAACTCTCTATGTATTTGCTGCAAGTACTTCTTCCGTTTTTAAAGCAACTGGATGAAGAACAGATGATTGAGACTGAGACAGAAGCTAAGATACAAGGGCTCTCAGTCTCCGAGCTAAATATAGTTAAGGCAGATTTCTCTTTAGAAGAGCGTGTGTACTGTGACAACTGCAAAACGTCAATATTCGATTACCACAGAAGCTGCAGAAAATGCTCTTTGGACTTTTGTCTTATCTGTTGCCGCGAGCTACGTAGTGGTCAGCTTGTAGGTGGTGCAGATCCAATCGAGTTCAAGTTTGTTTGGCAAGGTCGTGGTTACTTGCATGCTGAAAAAGCAATTGAAGAGGTAAAACTAATTGCATCAGATGCTGATGCTAAGCCTGAGGTTCATGAATGGTCAAGATCTGGGTGGCATGCACATAGTAATGGTAGCATTCCTTGTCCAAAAGTCAGTGATGAATGTGACCATGGTTTTCTTGAACTGAGAAGCATATTGGGCCAACATTTTATATCTGAGTTAGTTTGTAAAGGAAAAGAACTAGTGCAAGCATACAAGATTCAAGATGTAGTTAAGACTCCTGATGACTTCTGTTCATGTTTGAGGCTTGATAGAAACACAGATGTTAGATATAATAATAAGAGGAAGGCTGCTTCTCGTGCAAATTTGGCTGACAACTATTTATACTGTCCTCGGGCTGTAGATCTACAGGACAAGGATTTAAAGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAATGTACTTCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTACGTCATGTAACAAATACTAAGCGGGGTCAGCATTTGGATGTGGAAACTATTGATTGCTTAGATTGGTGTCAGGGGGAAATCAATATCCACCAATTCTTTACTGGTTATACAGAAGGTCGTATGGATTGGCTTTCTTGGCCTCAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATTTATTTGAGGAACAGTTGCCTCGTCATTGTGCTGAGTTCATATCGTCCTTACCCTTCAAGGAATATACTGATCCTCATAGAGGTGCTCTTAACCTTGCTGTGAAGTTGCCTAATAATTGTCTAAAGCCAGACATGGGGCCAAAGTCTTATATTGCTTATGGATTTCCCCAGGAGCTTGGGCGTGGTGATTCAGTGACTAAGCTCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAATTCTAAGCAACTTACTGCTATTGAGAAGTTGAAACAAAAGCACTTTGAGCAAGACAAAAGGGAGTTATTTGGTGGTTATCAGGATGGAGAAACTAATGCTGACATACTTAATAATTCATCTTCTACCATAAATGCTTTGGACAAACAAAATTGTGTTCAAGGCATGGAATACGAAGGTGGATTATGTGATAGGAAAGAAGTTGATCTGTTTCATCAATCTGGTAATAATGAGATTGTCATTGCCGAAGAGAATGGTCTTTTATGTGGATCAGAAGTCAAAGAGGTTGGCAAAGTAGAAATAAAACTAGAAAATGATTTGGTATTTGGGGGTGATGCTTCAGAAGGTGCACTCTGGGATATTTTTCGGAGGCAGGATGTATCAAAATTGCAAGAATATCTGAAGAAGCATTTCCGAGAGTTCAGGCATATCCATTGCTGTCCTTTAAAGCAGGTTATTCACCCCATTCATGACCAGACTTTCTATCTTACTATGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGTTAGGAGATGCAGTTTTTATTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATCAAGGTTGCGATGGATTTTGTGTCCCCTGAAAATGTTGGGGAGTGCTTTCGTTTGACAGAGGAATTTCGCACACTTCCAATAAATCACAAGTCCATAGAGGACAAATTGGAGGTGAAGAAAATAGCAGTATTTGCAATGAAAGATGTGGTTGGAAAGTTGGAGAAAGCAAGAATGCATAGTTTCCAGCTTTCTAATGAGTAG 2511 0.4062 MEQRNTDTRVDANPNPTHKESQPLKKKRGRKSKKVKEDMEKKKILDTTAVEGGVSEQRPSRKRKNDDGNCEFEMSGADKPYGLRGRKQEMIPKVIKKRAKEDIAEACPVCRGNCNCKACLSSDELINQMKKNAISDKDEKVELSMYLLQVLLPFLKQLDEEQMIETETEAKIQGLSVSELNIVKADFSLEERVYCDNCKTSIFDYHRSCRKCSLDFCLICCRELRSGQLVGGADPIEFKFVWQGRGYLHAEKAIEEVKLIASDADAKPEVHEWSRSGWHAHSNGSIPCPKVSDECDHGFLELRSILGQHFISELVCKGKELVQAYKIQDVVKTPDDFCSCLRLDRNTDVRYNNKRKAASRANLADNYLYCPRAVDLQDKDLKHFQWHWEKGEPVIVSNVLECTSGLSWEPLVMWRALRHVTNTKRGQHLDVETIDCLDWCQGEINIHQFFTGYTEGRMDWLSWPQILKLKDWPPSNLFEEQLPRHCAEFISSLPFKEYTDPHRGALNLAVKLPNNCLKPDMGPKSYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEVKLNSKQLTAIEKLKQKHFEQDKRELFGGYQDGETNADILNNSSSTINALDKQNCVQGMEYEGGLCDRKEVDLFHQSGNNEIVIAEENGLLCGSEVKEVGKVEIKLENDLVFGGDASEGALWDIFRRQDVSKLQEYLKKHFREFRHIHCCPLKQVIHPIHDQTFYLTMEHKRKLKEEYGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVAMDFVSPENVGECFRLTEEFRTLPINHKSIEDKLEVKKIAVFAMKDVVGKLEKARMHSFQLSNE 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01953 836 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 20 828 IPR045109 GO:0032454|GO:0033169
Spst2g01953 836 SUPERFAMILY Clavaminate synthase-like 375 806 - -
Spst2g01953 836 SMART cupin_9 482 793 IPR003347 -
Spst2g01953 836 MobiDBLite consensus disorder prediction 33 47 - -
Spst2g01953 836 MobiDBLite consensus disorder prediction 56 73 - -
Spst2g01953 836 Pfam JmjC domain, hydroxylase 680 776 IPR003347 -
Spst2g01953 836 Gene3D Cupin 363 802 - -
Spst2g01953 836 ProSiteProfiles JmjC domain profile. 501 793 IPR003347 -
Spst2g01953 836 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01953 Spst-Chr2 18583188 18597545 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Spst2g01953 JmjC 1.3e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01953 K15601 - gmx:100797799 1320.84