Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01937 ATGCAATTGGAGCTCGTGAAAAGGGCAGCTTCACAAGTCAAGGCGTTGGAGTCGTGGCAGCCCCATGTTTGGGGCCCTCTGCAGAAGAATGTGCAGAAATGGGAATACCCCTCTTTCGGGTTAATTTCTGGAGTCTGGGTTAAGTCAAATCCTCAACCGTGTGGGTATCTGGGGGAAATCTACTTCCCCTTCACAACAAGTCCCGATCCAAAATGTGGGTGGCAAATAAGGGGCTGTGACAACTTACATGCAGATAAAGAATTCTCACTGACAGGCCACAATTGGCATAAAATTGAAACCATATTCTTCCCTCCCACTTTCCATCTCAATTACCTTTCAATTTTCATCCGCCCTGATATTGACGCCGAATTTGCTCCAGAGCTGCTTGAAAAGCCTTTTGTTAACAATTTTAGCTTCTCCGGATGCTCTTGGGACTCCCATGACTACAAAAGCCAAATCCCTTCAAACATTTCAGAGATGACCTTATTATATACACACTGTCCTCACCACGATATCTATTTCAGTTCTACCCCTGTTCTCAGCTCTTCCATGCCCATCTCTATCCTTCTTCCATTCGCATGCTTACTAACCACTCGTACTTGCCCTTCATATACATTTCTATTCTCTATTCTCGAAATTAAATTAAACATACCCGAAAGTTGTTCATACTGTTACCCTCCCCTATGTAAATTTCGGTTTGAGGAGGGAAAAGGCCTCGTTTGTTTCCATGATGATGGACCCAAGTCTACAGAACCGCCGACTGATATGTCGAAACCGCCGACTTCTCAACCTGCTACGTCGAAGGCTAGGGACAGAGGTACTGAAGCAAGGAAGATGCAGGCCTCCAAAACGTATCAAGAAGGGCTTACTCTGCTTCCTTTAGAACTACAACGACCAGAGAGAGTGGACGTTTCTACTTTGGGGTCCCTGTCTTCTCCTATGAGGAGCTCCAAGAGGCAACCAACAATTTTGATCAAGCTAGGGAGCTTGGAGAAGGAGGCTTTGGAATTGTTTACTACGGTAAGGGACTCCAGATTCTCACACCCTTTTGCACTTACGCGTATTCACCCTATCAGTTTTCCAGGAATACTTCGAGATGGTCGTGAAGTTGCAGTGAAGCGCCTGATCGAGCGCAACTACAGGCCAGTGGAGTCATTCATCAATGAAATTCAGATCCTCAAAGGTCTGCGCCACAGAAACCTTGTGTGCCTCCATGGCTGCACTTCGCGTAACGGCCGCGAGTTACTTCTAGTATACGAGTACATCCCTAATGGCAGTGTTAGTTCCCATCTCCATGGTGATCGAGCAAATTCACGCCTTTTATCATGGCCTTTAAGAATGAAAATTGCCATAGAAACTGCTCGAGCATTGGCTTATCTCCACGCTTCTGTCATCATTCACCGGGATGTGAAAACCAGCAACATTCTCCTGGACAATGAGTTTGGTGTTAAGGTTTCGGATTTCGGTCTTTCAAGATTGTTCCCCGATGATGTCACTCACGTTTCCACAGTTCCAAGGGGAACCCCAGGTTATGTAGATCCGGATTATCGCCTATGCTACCAGCTGACAAAAAAGAGTGATGTATATAGCTTTGGAGTTGTGCTTGTTGAGTTAATATCATCTCTCAAAGCAGTTGATATGAATAGGGACAGGGAAGATATTAAGTTGGCAAATCTTGCCCTTAGGAAGATTCAAAAGGGATCCTTTTGTGAATTGGTAGATCCTTCCCTTGGTTTCCAGTCAGACGAGAAAGTAAAAAGTATGATAGGTTCAGTGGCAGAATTGGCCTCTCATTGTCTGCAAGGGGACAAGGATTTGAGACCCTCTATGGATGAAGTATTGTTGGAGCTGGAGAGAATTCACAGTGGCAGGGATGAACCACCGAATCCGGAGGAAATTGTCGTTCATCCCAGGGCTTCACAAAGCTATGCTCACCTACCTCGTCCAAACACTGTGATGAGCCCACAACACCTTCGCAAAACACACTGA 1989 0.457 MQLELVKRAASQVKALESWQPHVWGPLQKNVQKWEYPSFGLISGVWVKSNPQPCGYLGEIYFPFTTSPDPKCGWQIRGCDNLHADKEFSLTGHNWHKIETIFFPPTFHLNYLSIFIRPDIDAEFAPELLEKPFVNNFSFSGCSWDSHDYKSQIPSNISEMTLLYTHCPHHDIYFSSTPVLSSSMPISILLPFACLLTTRTCPSYTFLFSILEIKLNIPESCSYCYPPLCKFRFEEGKGLVCFHDDGPKSTEPPTDMSKPPTSQPATSKARDRGTEARKMQASKTYQEGLTLLPLELQRPERVDVSTLGSLSSPMRSSKRQPTILIKLGSLEKEALELFTTVRDSRFSHPFALTRIHPISFPGILRDGREVAVKRLIERNYRPVESFINEIQILKGLRHRNLVCLHGCTSRNGRELLLVYEYIPNGSVSSHLHGDRANSRLLSWPLRMKIAIETARALAYLHASVIIHRDVKTSNILLDNEFGVKVSDFGLSRLFPDDVTHVSTVPRGTPGYVDPDYRLCYQLTKKSDVYSFGVVLVELISSLKAVDMNRDREDIKLANLALRKIQKGSFCELVDPSLGFQSDEKVKSMIGSVAELASHCLQGDKDLRPSMDEVLLELERIHSGRDEPPNPEEIVVHPRASQSYAHLPRPNTVMSPQHLRKTH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01937 662 ProSiteProfiles Protein kinase domain profile. 335 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01937 662 Pfam Protein kinase domain 365 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01937 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Spst2g01937 662 Gene3D Transferase(Phosphotransferase) domain 1 423 626 - -
Spst2g01937 662 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 361 655 IPR044652 GO:0004672
Spst2g01937 662 FunFam Wall-associated receptor kinase-like 20 422 629 - -
Spst2g01937 662 SUPERFAMILY Protein kinase-like (PK-like) 365 643 IPR011009 -
Spst2g01937 662 MobiDBLite consensus disorder prediction 244 282 - -
Spst2g01937 662 SMART serkin_6 335 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01937 662 MobiDBLite consensus disorder prediction 644 662 - -
Spst2g01937 662 Gene3D Phosphorylase Kinase; domain 1 358 422 - -
Spst2g01937 662 MobiDBLite consensus disorder prediction 641 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01937 Spst-Chr2 18460575 18463520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01937 360 637 Receptor kinase-like Gene Family AT1G25390 60.424 5.82e-109 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst2g01937 Pkinase 8.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01937 - - var:108334729 601.668