Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01936 ATGAGTTGCAATGACAAAACTTCTGGTGGTAATCTCCACGTTAGGGCTGTAATTTGCAATGCTGCTGCTGGTGCCGCTTCTGGGGCAATAGCGGCTACATTTGTGTGCCCATTGGATGTGATCAAGACTAGGCTACAAGTCCATGGCCTTCCTCATGGGCAGAAAGGTAATGTCATTGTCACAAGTTTGCAAAATATAGTAAGGAATGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCAACGATACTGGCATTACTTCCAAACTGGGCAGTTTACTTCACAAGTTATGAGCAACTAAAGGGCCTGCTTCGTTCCCGTGATGGTTGCAACGAACTCACAACTATGGGAAATATTATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCAATTTCTACAAATCCATTATGGGTTGTTAAGACAAGACTACAAACACAAGGAATGAGGCCTGATGTTGTTCCTTACAAGAGTGTTCTTTCTGCTCTGACTAGGATTACACATGAGGAAGGCATACGAGGCCTATATAGTGGCATTATTCCTTCATTGGCTGGTATAAGTCATGTTGCAATTCAGTTTCCAGCATATGAAAAGATCAAGTCATACATGGCAGAAAAAGACAACACAACTGTTGATAAGCTAAGTACTGGGAGTGTTGCCATTGCATCTTCAATTTCAAAAGTATTTGCCTCTGTAATGACTTATCCACATGAGGTAATACGATCCCGGCTGCAAGAGCAAGGGCAGGCAAAAAATAATGGGATCCAATATGCAGGGGTTGTTGACTGTACTAAGAAGGTGTTTCAAAAGGAAGGCATTCCAGGATTTTATCGTGGTTGCGCAACCAATCTATTGAGAACAACTCCATCTGCTGTTATTACATTCACGAGTTATGAGATGATAAACAGGTTTTTGAAGCGAGTTGTAGCCCGAGAGGATAAGGGGTATCCTCAAGGCTCTTCCAAATCCAATGAACCGAACAAACCCCACCCAGAAGCCAGTGGCATCGATAGGGGGCCACCACCTTCTCAGTCTAACATGAAAGCTTCGTCAATTCCTCTCGGAAAGAAAGAGCAGCTAACAAGACATTGA 1089 0.4408 MSCNDKTSGGNLHVRAVICNAAAGAASGAIAATFVCPLDVIKTRLQVHGLPHGQKGNVIVTSLQNIVRNEGFRGMYRGLSPTILALLPNWAVYFTSYEQLKGLLRSRDGCNELTTMGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGIRGLYSGIIPSLAGISHVAIQFPAYEKIKSYMAEKDNTTVDKLSTGSVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKNNGIQYAGVVDCTKKVFQKEGIPGFYRGCATNLLRTTPSAVITFTSYEMINRFLKRVVAREDKGYPQGSSKSNEPNKPHPEASGIDRGPPPSQSNMKASSIPLGKKEQLTRH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01936 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Spst2g01936 362 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 309 IPR044712 GO:0006862|GO:0055085
Spst2g01936 362 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Spst2g01936 362 Gene3D Mitochondrial carrier domain 15 304 IPR023395 -
Spst2g01936 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Spst2g01936 362 MobiDBLite consensus disorder prediction 313 362 - -
Spst2g01936 362 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Spst2g01936 362 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Spst2g01936 362 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Spst2g01936 362 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Spst2g01936 362 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Spst2g01936 362 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Spst2g01936 362 Pfam Mitochondrial carrier protein 214 305 IPR018108 -
Spst2g01936 362 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Spst2g01936 362 Pfam Mitochondrial carrier protein 19 105 IPR018108 -
Spst2g01936 362 SUPERFAMILY Mitochondrial carrier 19 299 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01936 Spst-Chr2 18453831 18457820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01936 14 356 Chloroplast and Mitochondria Gene Families AT1G25380 64.773 1.08e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01936 K15115 - gmx:100797064 622.083