Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01934 ATGGCGTCGGCGTCACCCCCTTCTCCGTCCCTCCTCCTCCTCCTCTTCGCCACCGCCATCTCCCTCTCCTTTCAACTCTCCCCCGTCGTTCACTCCACCAACTCCGACTTCCACGCGCTAATGTCGTTCAAAGCCGCTTCCGACCCTTCCAACACACTCGCCCAGTGGAACTCCACAACCTCAAACCCCTGCAACTGGTACGGTGTCTCCTGTCTCCGCAACCGCGTCTCTCGCCTCGTCCTCCAAGACCTCAACCTCACCGGCTCCATCCTTCCGCTAACCTCCCTCACCCAACTTCGCATCCTCAGCCTCAAACGCAACAGTTTCAGCGGCCCCATTACCTCTCTCGCCAACCTCACCGCCCTCCGCCTCCTCTTCCTCTCCCACAACAACTTCTCCGGCCACCTCCCCGCCGCGCTCATCTCCCTCTACCGCCTTGATCTCTCCCACAACAGCCTCTCCGGCGAGATTCCCACCACGCTCAACCTCTGGACCCACCTCCTCACTCTTCGCCTCGACCACAACCGCCTCCGCGGCCGCATTCCCAGCACCATCAACCTCTCTCATCTCCAAGATTTCAACGTCTCAAACAACCTCTTATCGGGTGAAATACCCGAGTCTCTCTCGGGTTTGCCAGGATCCGCGTTTTCTCACAACCCCTCACTCTGCGGAGCTCCCTTGCGAGAATGCAAAGGCAAAGCAATCATCCCAGCCCTGGCTTCGCCGTTGAAGCCGCAAAACGACACCGTTTTCTACAAACCCCGCGGGGGCGAGAGAATGGGGGTGGTGGTCTTGATCGGTTTCGTGGTGAGCGACGTGTTGGTGCTGGGTTTGGTGTCGGTGCTTCTCTACTGGTATTTCTGGCGTAAGTACTCTGGTGCCACAGAATTGAGAAACGAGGGGAAAGAGAACGGTGGTGGTGGAATGGTGGTTTTGGAAGGGGGGAGAAGGTTTGAGTTGGAGGAGTTGTTGCGTGCGTCGGCGGAGATGTTGGGGAAGGGGGCATTTGGGAGTTCGTATAAAGCGGTGGTTGATGATGGGAGTGTGGTGGCGGTGAAGAGGGTGACGGAGGTTAGTGTTGGAGGGAAGAAGGAGTTCCACGACAGAATGCAAGAGCTTGGAAGGTTGAGACACTGCAATCTTGTTAGTTTGAGGGCTTACTATTTTTCCAAACATCACAACTTCCTCGTCTCTGATTTCATGCCCAATCATAGCTTCTCATCCCTTCTCCACGGTAATAGAGGACCAGGGCGGAGCCCAGTGGATTGGAGCACGAGGCTGAAGATCGTAGCTGGAGCGGCACGAGGCGTGGCCTTCATTCACAGTCATAAACTAACCCACGGTAACATCAAATCCACCAACGTCCTTATTGACGTCGCCGGCAACGGCCGCGTCGCCGATTTCGGCCTCTCCATCTTTGCTCCTGCCTCCGCTCTAAGCTCCAATGGCTACCGCGCGCCGGAGCTATCGGACCCTCGCAAGCAGACGCAGATGTCTGACGTCTACTCCTTCGGCGTTCTATTGATGGAGATGCTCACGGGGAAGTGTCCCTCCGCTGTGGACGGCGGGCACGAGGAGGCGGTGGACCTTCCTAGGTGGGTCCGGTCGGTGGTGAGAGAGGACTGGACGGCGGAGGTGTTCGATCTAGAACTGCTGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGTTGCTGCAGATAGCTATGGCGTGCACTGCAGCCGCACCTGACCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATCGAGGAATTGCGTGGAGTCCAGGTGTCACCGGGTCATGACGCGTTGGACATGGTGTCCGAGTCACTCTCCGTGGCTGAAGATGCAGCATGTACAGGTGGTGGACCAAGTGGATTTTAG 1884 0.5738 MASASPPSPSLLLLLFATAISLSFQLSPVVHSTNSDFHALMSFKAASDPSNTLAQWNSTTSNPCNWYGVSCLRNRVSRLVLQDLNLTGSILPLTSLTQLRILSLKRNSFSGPITSLANLTALRLLFLSHNNFSGHLPAALISLYRLDLSHNSLSGEIPTTLNLWTHLLTLRLDHNRLRGRIPSTINLSHLQDFNVSNNLLSGEIPESLSGLPGSAFSHNPSLCGAPLRECKGKAIIPALASPLKPQNDTVFYKPRGGERMGVVVLIGFVVSDVLVLGLVSVLLYWYFWRKYSGATELRNEGKENGGGGMVVLEGGRRFELEELLRASAEMLGKGAFGSSYKAVVDDGSVVAVKRVTEVSVGGKKEFHDRMQELGRLRHCNLVSLRAYYFSKHHNFLVSDFMPNHSFSSLLHGNRGPGRSPVDWSTRLKIVAGAARGVAFIHSHKLTHGNIKSTNVLIDVAGNGRVADFGLSIFAPASALSSNGYRAPELSDPRKQTQMSDVYSFGVLLMEMLTGKCPSAVDGGHEEAVDLPRWVRSVVREDWTAEVFDLELLSYKDIEEEMVALLQIAMACTAAAPDQRPRMSHVVKMIEELRGVQVSPGHDALDMVSESLSVAEDAACTGGGPSGF 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01934 627 Gene3D Phosphorylase Kinase; domain 1 309 400 - -
Spst2g01934 627 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 595 IPR046959 -
Spst2g01934 627 SUPERFAMILY L domain-like 56 237 - -
Spst2g01934 627 SUPERFAMILY Protein kinase-like (PK-like) 329 589 IPR011009 -
Spst2g01934 627 Gene3D Transferase(Phosphotransferase) domain 1 401 605 - -
Spst2g01934 627 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Spst2g01934 627 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 599 - -
Spst2g01934 627 ProSiteProfiles Protein kinase domain profile. 325 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01934 627 Pfam Protein kinase domain 329 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01934 627 Gene3D Ribonuclease Inhibitor 142 230 IPR032675 -
Spst2g01934 627 Gene3D Ribonuclease Inhibitor 35 141 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01934 Spst-Chr2 18444705 18448118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01934 35 621 Receptor kinase-like Gene Family AT1G68400 57.477 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst2g01934 Pkinase 1.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01934 - - vun:114168386 892.108