Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01925 ATGGAGGATCAAATCCACGGTCACACCAAAAGGATAAACCCGAATTCCCCCGCATGCTTGAAACTCTTCGGCTTCAGCTTCGTTCACGAAGATATCGTGGACGAAGCCGAAACAAGCGTCGCGCTGGAAGATGCGTCGGATTCAACCGCCAAGCCTACGTCACCAGACTCCAGCGGCGCCTCCGGGTTTCCGACCTCTTCCGGCGACCGCAAATACGAGTGTCAGTACTGTTGCCGCGAGTTCGCCAACTCGCAAGCTCTCGGTGGACACCAAAACGCGCACAAGAAAGAGCGGCAACAGCTGAAGCGCGCGCAGTTACAAGCCACGCGAAACGCCGCCGTTTCTTTCGTTCGGAATCCGATCATCTCAGCCTTCGCGCCGCCGCCTCACCTGCTGGCCACTCAGGGACCAGTGATGGCGCCGGCTGCCCCGCCGTCGTGGGTGTACATGCCACCGCGTGCTGCGCCTCCTCCCTTCCACGTGTCGGTTTCACACGGATGCGTGTTCCCCTCGGCTAACAGTGCCGTCATGAGTAACTGTAACGGTAGCATTGTTACGGGTGCGAGATCGGCGGGTGCAGGGGTGTTGCCCTATGTTGGCGGAGTAGGGGATTCGTCGTCCGCATTTTCCAGTATGGGCTCCCAAGTACAGGCCGGAGCCCACTATGGGAGGATTGATGGGCCATCTCTGAGTAAACTCTCTAGAGGAGAGGTGGGGTCCAGTTTTGATGACGGCTTCGGCTTGGACTTGCACCTTAGCCTAGCTCCGCCATGA 774 0.5879 MEDQIHGHTKRINPNSPACLKLFGFSFVHEDIVDEAETSVALEDASDSTAKPTSPDSSGASGFPTSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLATQGPVMAPAAPPSWVYMPPRAAPPPFHVSVSHGCVFPSANSAVMSNCNGSIVTGARSAGAGVLPYVGGVGDSSSAFSSMGSQVQAGAHYGRIDGPSLSKLSRGEVGSSFDDGFGLDLHLSLAPP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01925 257 PANTHER ZINC FINGER PROTEIN 5 12 256 IPR044299 GO:0010090
Spst2g01925 257 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Spst2g01925 257 Gene3D Classic Zinc Finger 59 119 - -
Spst2g01925 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Spst2g01925 257 MobiDBLite consensus disorder prediction 43 68 - -
Spst2g01925 257 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Spst2g01925 257 FunFam Zinc finger protein GIS3 60 122 - -
Spst2g01925 257 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01925 Spst-Chr2 18359300 18360073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01925 20 256 C2H2 Transcription Factor Family AT1G68360 47.843 1.36e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01925 - - pvu:PHAVU_002G082900g 397.127