Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01898 ATGAGAAGAACCAATTTGCCACCAAAGGAGGAAATTCATCAGGGTAAAGGAGAAAGTTTACGAATTGAGAGGGGTGGCCTACATGACAATTGGGATGATGCAGAGGGTTATTACAGTTATCGATTTGGTGAAGTGCTTGATGGCCGATATGAAGTCATTGCTGCTCATGGGAGAGGTGTCTTTTCAACAGTAGTCCGGGCAAAGAATCTTAACATCAGTAATGGGGAACCTGGAGAAGTTGCCATAAAAATAATTCGTAGTAATGACACAATGTACAAGGCTGGTATGGATGAGTTAGTGATATTGAAGAAATTAGTTGGTGCTGATCCAGATGATAAGCGGCATTGTGTTCGATTCCTTTCTAGTTTCAAGTACAGGAATCACCTTTGTCTAGTTTTTGAATCTCTCCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCAATTAGAGCGTATGCTAAACAACTTTTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTCTCCATTGTGATATAAAACCAGATAATATGTTGGTGAACGAGGCCAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTAGTGAGCCGCTTTTATCGTGCCCCTGAAATCATACTTGGCTTAACCTATGATCATCCATTGGATATGTGGTCTGTAGGATGTTGTTTGTATGAGCTCTATACAGGCAAAGTTCTTTTTCCAGGTTCTACTAACAATGACATGCTACGGCTCCATATGGAATTGAAGGGCATTTTTCCGAAAAAGATGCTTCGTAAGGGAGCATTTATTGAACAGCATTTTGATCAGGACCTGAATTTTCTTGCTACCGAGGAAGACCCTGTGACGAAAAAGGCAATAAAGCGGATGATTCTCAACATAAAACCAAAAGATATTGGAACAATTATCACTGGCTCTGTAGGGGAGGATCCAAAGATGCTAGCCAATTTTAAGGATCTTCTGGAAAAAGTTTTTGTATTGGATCCAGACAAGAGGTTGACAGTCTCACAGGCGTTGAATCACCCATTCATCACTGGCAAGTGA 1107 0.4047 MRRTNLPPKEEIHQGKGESLRIERGGLHDNWDDAEGYYSYRFGEVLDGRYEVIAAHGRGVFSTVVRAKNLNISNGEPGEVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAIRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLTYDHPLDMWSVGCCLYELYTGKVLFPGSTNNDMLRLHMELKGIFPKKMLRKGAFIEQHFDQDLNFLATEEDPVTKKAIKRMILNIKPKDIGTIITGSVGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01898 368 ProSiteProfiles Protein kinase domain profile. 50 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01898 368 Gene3D Phosphorylase Kinase; domain 1 21 109 - -
Spst2g01898 368 Gene3D Transferase(Phosphotransferase) domain 1 110 366 - -
Spst2g01898 368 Pfam Protein kinase domain 51 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g01898 368 FunFam Serine/threonine-protein kinase PRP4 homolog 110 366 - -
Spst2g01898 368 CDD STKc_PRP4 49 365 IPR044092 GO:0004674|GO:0006468|GO:0045292
Spst2g01898 368 PANTHER DUAL SPECIFICITY PROTEIN KINASE 33 366 - -
Spst2g01898 368 SUPERFAMILY Protein kinase-like (PK-like) 37 367 IPR011009 -
Spst2g01898 368 FunFam serine/threonine-protein kinase PRP4 homolog 21 109 - -
Spst2g01898 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Spst2g01898 368 SMART serkin_6 50 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01898 Spst-Chr2 18114595 18117427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01898 35 367 MAP Kinase Gene Family AT2G18170 30.372 5.77e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Spst2g01898 Pkinase 5.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01898 K08827 - gmx:100784523 675.626