Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01867 ATGCTTCCCCGGAAAATGGGGTTTCGTGATTACATCGAAGCATTGGAGGAAGAAAGGAGGAAAATTCAAGTTTTCCCCAAAGAGCTTCCTCTGTCGTTGGAGCTTGTCACGCAAGCAATTGAGGGGTGTAGACAGCAATTGTCTGGAACGGTTGCGGATTACAATCTGAATGGCCAATCGGAGTGTTCAGAGCAGACATCAATGGATGAAGGACCTGCTTTTGAGGAATTCATTCCTATTAAGAAAAGGGCATCTCAAGATTCTGTTGAAGAAGAAGACGACGAAGATGAAGATGAACAACATTCTCATCAGCTAAAGAAAACCACTTCTGATAAAAAGAAATCAGATTGGCTCAGATCCGTTCAGTTGTGGAATCCCAATCCCCCTCCTACCAAAGAGGATGTGCCTAGAAAAACAAATGTTGTTGAAGTGAAGAGAAACGGTGGAGCTTTTCAACCGTTCCAAAGAGATGAAAAAAGTGTGGTTAATGGAAAGGCTAATAATGGTGCATCAGCAATTGGTAAAGCACCCTCTTCACCACCAGTGCCTGCTACAAGTTCCACAGGACCAATGAGAATAGACAGCAAAAAAGAGGAGAAAGGACAGGCTCAGAGAAAGCAACGTAGGTGTTGGTCGCAGGAATTGCACAAGCGATTCTTGCATGCACTTCAGCAACTTGGAGGTGCAGATTCTGCCACGCCCAAACAGATCAGGGAGCTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGCCATCTACAGAAATTTCGTCTACACACTAGAAGAAGCCCCATAATGCACAACAATGGAAGTTCACAAGCAGCCCCTTTGTTTCTTGTGGGGAACATTTTTGTGCAGCCACCAGAATATGGTGCAGTGGCTACATCAACAGCTTCTGGAGGAGAATTGACCACAGTTTCTGCTCCAACTGGAATATATGCACCAGTGGCTGCACACCCTCCACCTGTCACACACGCAACAATTATGAAGCATTCACATTCTCAAGAAAGACCTAATAATCACAGTGTTCATTCAGACTCACCTGCCTCATCATCCTCCACACACACCATCACAGCTCCTTCACATGCCCCTTGA 1101 0.4514 MLPRKMGFRDYIEALEEERRKIQVFPKELPLSLELVTQAIEGCRQQLSGTVADYNLNGQSECSEQTSMDEGPAFEEFIPIKKRASQDSVEEEDDEDEDEQHSHQLKKTTSDKKKSDWLRSVQLWNPNPPPTKEDVPRKTNVVEVKRNGGAFQPFQRDEKSVVNGKANNGASAIGKAPSSPPVPATSSTGPMRIDSKKEEKGQAQRKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPIMHNNGSSQAAPLFLVGNIFVQPPEYGAVATSTASGGELTTVSAPTGIYAPVAAHPPPVTHATIMKHSHSQERPNNHSVHSDSPASSSSTHTITAPSHAP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01867 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 263 IPR017930 -
Spst2g01867 366 MobiDBLite consensus disorder prediction 332 366 - -
Spst2g01867 366 FunFam Myb family transcription factor 205 263 - -
Spst2g01867 366 MobiDBLite consensus disorder prediction 343 366 - -
Spst2g01867 366 MobiDBLite consensus disorder prediction 99 115 - -
Spst2g01867 366 MobiDBLite consensus disorder prediction 165 209 - -
Spst2g01867 366 MobiDBLite consensus disorder prediction 76 115 - -
Spst2g01867 366 Pfam Myb-like DNA-binding domain 208 257 IPR001005 -
Spst2g01867 366 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 341 IPR044787 GO:0003700|GO:0006355
Spst2g01867 366 SUPERFAMILY Homeodomain-like 204 264 IPR009057 -
Spst2g01867 366 MobiDBLite consensus disorder prediction 192 209 - -
Spst2g01867 366 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 261 IPR006447 GO:0003677
Spst2g01867 366 Gene3D - 205 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01867 Spst-Chr2 17786910 17789287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01867 10 324 G2-like Transcription Factor Family AT1G68670 47.147 3.15e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst2g01867 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01867 - - gmx:100819750 558.14