Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g01854 ATGATAATTGATGGTGACAAGGGAATGGACTCTATAGCAGTTCTTTCTGACAGAGTTGCGTTATCTGATGACAATGCGCCAATGCCAGCTGATAAGACACAATTAGGGTCATGGTTTGATACACATGTAACGCCTTTAGATAAAAGAAAGAGTACCTTGGACCCCGCATTGGTGGCTGCTGAACAAGGTGTCAAGATTGTGAAGGTCATGCAAGATGGCAGTGGGGAATTCAAGACCATCACCGATGCCCTTAAAAGCATTCCCAGTGGGAACACCCAGCGTATAATTTTGTACATTGGACCTGGAAATTACAACGAGAAAATCACAGTTGAGAAGACTAAACCTTTCATCACCTTCTACGGGGCACCTGGTAAAATGCCAAACATTACCTACGGGGGCACGGCAAAACAATATGGCACTGTTGATAGTGCCACAGTGATCGTTCTATCAGATTACTTTGTGGCAGCCAACATAATGATCTCGAACTCAGCACCAAGACCTGATATAAACACTAAAGGAGGTCAAGCAGTTGCATTACGAATTTCTGGAGACAAAGCATCATTTTATGATGTCCAGCTATACGGGTTCCAAGACACAGTGTGCGATGATGCACATAGACATTTTTTCAAAAACTGCTACATTCAAGGAACCGTTGATTATATTTTTGGAAGTGGGAAGTCACTATATGTGAATTGTGAACTAAGAACGCTTGGCGATGCTATGGATACTTTTATAACCGCACAAGCAAGAAAAAATGAGCAAGAGGACAATGGATACTTCTTCGTACATTGTGAACTTACTGGAACCGGAACTGGTGCTTACTTGGGAAGAGCGTGGTTTTCTCATTCCACAGTGGTGTTTTCTTACTGTAACATGGGTAACATTTTCAACAAGGTAGCCTGGAGTAACAACAATCACAAGGAATATGACAAGTAA 936 0.4209 MIIDGDKGMDSIAVLSDRVALSDDNAPMPADKTQLGSWFDTHVTPLDKRKSTLDPALVAAEQGVKIVKVMQDGSGEFKTITDALKSIPSGNTQRIILYIGPGNYNEKITVEKTKPFITFYGAPGKMPNITYGGTAKQYGTVDSATVIVLSDYFVAANIMISNSAPRPDINTKGGQAVALRISGDKASFYDVQLYGFQDTVCDDAHRHFFKNCYIQGTVDYIFGSGKSLYVNCELRTLGDAMDTFITAQARKNEQEDNGYFFVHCELTGTGTGAYLGRAWFSHSTVVFSYCNMGNIFNKVAWSNNNHKEYDK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g01854 311 Gene3D - 13 311 IPR012334 -
Spst2g01854 311 Pfam Pectinesterase 67 305 IPR000070 GO:0030599|GO:0042545
Spst2g01854 311 SUPERFAMILY Pectin lyase-like 67 306 IPR011050 -
Spst2g01854 311 ProSitePatterns Pectinesterase signature 2. 214 223 IPR033131 -
Spst2g01854 311 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 61 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g01854 Spst-Chr2 17630882 17637778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g01854 12 311 Carbohydrate Esterase AT1G69940 52.333 6.97e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g01854 K01051 - gmx:100813174 471.47